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NOM1 nucleolar protein with MIF4G domain 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100394513, updated on 3-Apr-2024

Summary

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Gene symbol
NOM1
Gene description
nucleolar protein with MIF4G domain 1
See related
Ensembl:ENSCJAG00000004336
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 8 NC_071449.1 (88571482..88596323, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 8 NC_048390.1 (89349980..89370984, complement)

Chromosome 8 - NC_071449.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118143727 Neighboring gene motor neuron and pancreas homeobox 1 Neighboring gene uncharacterized LOC118143730 Neighboring gene limb development membrane protein 1 Neighboring gene phosphoglycerate mutase 1-like Neighboring gene ring finger protein 32

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ribosomal small subunit biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleolar MIF4G domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071449.1 Reference mCalJa1.2.pat.X

    Range
    88571482..88596323 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035254266.2 → XP_035110157.1  nucleolar MIF4G domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    U3FIM2
    Conserved Domains (2) summary
    pfam02854
    Location:365 → 561
    MIF4G; MIF4G domain
    cl02653
    Location:657 → 763
    MA3; MA3 domain

  2. XM_009002763.4 → XP_009001011.1  nucleolar MIF4G domain-containing protein 1 isoform X2

    See identical proteins and their annotated locations for XP_009001011.1

    UniProtKB/TrEMBL
    F7CMY4, U3FIM2
    Related
    ENSCJAP00000007851.2
    Conserved Domains (2) summary
    pfam02854
    Location:364 → 560
    MIF4G; MIF4G domain
    cl02653
    Location:656 → 762
    MA3; MA3 domain

  3. XM_054237512.1 → XP_054093487.1  nucleolar MIF4G domain-containing protein 1 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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