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LUC7L LUC7 like [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100390787, updated on 8-Mar-2024

Summary

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Gene symbol
LUC7L
Gene description
LUC7 like
See related
Ensembl:ENSCJAG00000011674
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Also known as
LUC7-like
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 12 NC_071453.1 (217587..246469, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 12 NC_048394.1 (241975..270907, complement)

Chromosome 12 - NC_071453.1Genomic Context describing neighboring genes Neighboring gene hemoglobin subunit alpha Neighboring gene hemoglobin subunit theta 1 Neighboring gene 40S ribosomal protein S8-like Neighboring gene family with sequence similarity 234 member A Neighboring gene Rho GDP dissociation inhibitor gamma Neighboring gene regulator of G protein signaling 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Development of the first marmoset-specific DNA microarray (EUMAMA): a new genetic tool for large-scale expression profiling in a non-human primate. Datson NA, et al. BMC Genomics, 2007 Jun 25. PMID 17592630, Free PMC Article
  2. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splice site recognition IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U1 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U2-type prespliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative RNA-binding protein Luc7-like 1
Names
RNA-binding protein Luc7-like 1-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071453.1 Reference mCalJa1.2.pat.X

    Range
    217587..246469 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002755725.6 → XP_002755771.1  putative RNA-binding protein Luc7-like 1 isoform X3

    See identical proteins and their annotated locations for XP_002755771.1

    UniProtKB/TrEMBL
    B0VX80, F6PSJ6
    Related
    ENSCJAP00000050264.1
    Conserved Domains (1) summary
    pfam03194
    Location:5 → 242
    LUC7; LUC7 N_terminus

  2. XM_017978588.3 → XP_017834077.1  putative RNA-binding protein Luc7-like 1 isoform X4

    UniProtKB/TrEMBL
    F6PSJ6

  3. XM_054242366.1 → XP_054098341.1  putative RNA-binding protein Luc7-like 1 isoform X1

  4. XM_054242367.1 → XP_054098342.1  putative RNA-binding protein Luc7-like 1 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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