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PSTPIP2 proline-serine-threonine phosphatase interacting protein 2 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100390433, updated on 8-Mar-2024

Summary

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Gene symbol
PSTPIP2
Gene description
proline-serine-threonine phosphatase interacting protein 2
See related
Ensembl:ENSCJAG00000008457
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See PSTPIP2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 13 NC_071454.1 (84035644..84136346, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 13 NC_048395.1 (85143282..85243558, complement)

Chromosome 13 - NC_071454.1Genomic Context describing neighboring genes Neighboring gene sialic acid binding Ig like lectin 15 Neighboring gene ectopic P-granules 5 autophagy tethering factor Neighboring gene U3 small nucleolar RNA-associated protein 18 homolog Neighboring gene 40S ribosomal protein S26-like Neighboring gene methylosome protein 50-like Neighboring gene U7 small nuclear RNA Neighboring gene ATP synthase F1 subunit alpha Neighboring gene U6 spliceosomal RNA Neighboring gene HAUS augmin like complex subunit 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament polymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proline-serine-threonine phosphatase-interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071454.1 Reference mCalJa1.2.pat.X

    Range
    84035644..84136346 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054244144.1 → XP_054100119.1  proline-serine-threonine phosphatase-interacting protein 2 isoform X2

  2. XM_002757211.5 → XP_002757257.1  proline-serine-threonine phosphatase-interacting protein 2 isoform X1

    See identical proteins and their annotated locations for XP_002757257.1

    UniProtKB/TrEMBL
    F7H9V5
    Related
    ENSCJAP00000015610.1
    Conserved Domains (1) summary
    cd07672
    Location:15 → 254
    F-BAR_PSTPIP2; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Proline-Serine-Threonine Phosphatase-Interacting Protein 2

  3. XM_054244143.1 → XP_054100118.1  proline-serine-threonine phosphatase-interacting protein 2 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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