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ARG2 arginase 2 [ Sus scrofa (pig) ]

Gene ID: 100155893, updated on 17-Aug-2024

Summary

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Official Symbol
ARG2provided by VGNC
Official Full Name
arginase 2provided by VGNC
Primary source
VGNC:VGNC:85455
See related
Ensembl:ENSSSCG00000002294
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Broad expression in kidney (RPKM 54.0), liver (RPKM 17.2) and 6 other tissues See more
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 7 NC_010449.5 (91343987..91385911)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 7 NC_010449.4 (97650711..97693055)

Chromosome 7 - NC_010449.5Genomic Context describing neighboring genes Neighboring gene pleckstrin homology domain-containing family H member 1-like Neighboring gene pleckstrin homology domain-containing family H member 1 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class H Neighboring gene deoxycytidine kinase pseudogene Neighboring gene vesicle transport through interaction with t-SNAREs 1B Neighboring gene retinol dehydrogenase 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
  2. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arginase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables manganese ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arginine catabolic process to ornithine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arginase-2, mitochondrial
Names
arginase, type II

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010449.5 Reference Sscrofa11.1 Primary Assembly

    Range
    91343987..91385911
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001928679.5 → XP_001928714.1  arginase-2, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A4X1U8K8, A0A8D0YYD8, F1SA26
    Related
    ENSSSCP00000002491.2, ENSSSCT00000002555.6
    Conserved Domains (1) summary
    cd09989
    Location:26 → 321
    Arginase; Arginase family

  2. XM_013989111.2 → XP_013844565.1  arginase-2, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8D0Z0W9
    Conserved Domains (1) summary
    cd09989
    Location:32 → 291
    Arginase; Arginase family
Nucleotide Protein
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Gene LinkOut

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