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PGGHG protein-glucosylgalactosylhydroxylysine glucosidase [ Equus caballus (horse) ]

Gene ID: 100146757, updated on 8-Mar-2024

Summary

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Official Symbol
PGGHGprovided by VGNC
Official Full Name
protein-glucosylgalactosylhydroxylysine glucosidaseprovided by VGNC
Primary source
VGNC:VGNC:69325
See related
Ensembl:ENSECAG00000002017
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
14
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 12 NC_009155.3 (36880842..36888064, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 12 NC_009155.2 (32988214..32990464, complement)

Chromosome 12 - NC_009155.3Genomic Context describing neighboring genes Neighboring gene interferon-induced transmembrane protein 1 Neighboring gene interferon induced transmembrane protein 5 Neighboring gene NLR family pyrin domain containing 6 Neighboring gene uncharacterized LOC106781507 Neighboring gene proteasome 26S subunit, non-ATPase 13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein-glucosylgalactosylhydroxylysine glucosidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009155.3 Reference EquCab3.0 Primary Assembly

    Range
    36880842..36888064 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023654865.1 → XP_023510633.1  protein-glucosylgalactosylhydroxylysine glucosidase isoform X3

    UniProtKB/TrEMBL
    F6TSW6
    Conserved Domains (2) summary
    COG1554
    Location:209 → 642
    ATH1; Trehalose and maltose hydrolase (possible phosphorylase) [Carbohydrate transport and metabolism]
    pfam10222
    Location:16 → 297
    DUF2152; Uncharacterized conserved protein (DUF2152)

  2. XM_023654866.1 → XP_023510634.1  protein-glucosylgalactosylhydroxylysine glucosidase isoform X4

    UniProtKB/TrEMBL
    F6TSW6
    Conserved Domains (2) summary
    COG1554
    Location:209 → 617
    ATH1; Trehalose and maltose hydrolase (possible phosphorylase) [Carbohydrate transport and metabolism]
    pfam10222
    Location:16 → 297
    DUF2152; Uncharacterized conserved protein (DUF2152)

  3. XM_023654863.1 → XP_023510631.1  protein-glucosylgalactosylhydroxylysine glucosidase isoform X1

    UniProtKB/TrEMBL
    A0A3Q2KSQ3, F6TSW6
    Related
    ENSECAP00000026866.2, ENSECAT00000061650.2
    Conserved Domains (2) summary
    COG1554
    Location:209 → 686
    ATH1; Trehalose and maltose hydrolase (possible phosphorylase) [Carbohydrate transport and metabolism]
    pfam10222
    Location:16 → 297
    DUF2152; Uncharacterized conserved protein (DUF2152)

  4. XM_023654868.1 → XP_023510636.1  protein-glucosylgalactosylhydroxylysine glucosidase isoform X6

    UniProtKB/TrEMBL
    F6TSW6
    Conserved Domains (2) summary
    COG1554
    Location:209 → 577
    ATH1; Trehalose and maltose hydrolase (possible phosphorylase) [Carbohydrate transport and metabolism]
    pfam10222
    Location:16 → 297
    DUF2152; Uncharacterized conserved protein (DUF2152)

  5. XM_023654864.1 → XP_023510632.1  protein-glucosylgalactosylhydroxylysine glucosidase isoform X2

    UniProtKB/TrEMBL
    F6TSW6
    Related
    ENSECAP00000001397.3, ENSECAT00000001931.3
    Conserved Domains (2) summary
    COG1554
    Location:209 → 661
    ATH1; Trehalose and maltose hydrolase (possible phosphorylase) [Carbohydrate transport and metabolism]
    pfam10222
    Location:16 → 297
    DUF2152; Uncharacterized conserved protein (DUF2152)

  6. XM_023654867.1 → XP_023510635.1  protein-glucosylgalactosylhydroxylysine glucosidase isoform X5

    UniProtKB/TrEMBL
    F6TSW6
    Conserved Domains (2) summary
    COG1554
    Location:209 → 629
    ATH1; Trehalose and maltose hydrolase (possible phosphorylase) [Carbohydrate transport and metabolism]
    pfam10222
    Location:16 → 297
    DUF2152; Uncharacterized conserved protein (DUF2152)

  7. XM_023654869.1 → XP_023510637.1  protein-glucosylgalactosylhydroxylysine glucosidase isoform X7

    Conserved Domains (2) summary
    COG1554
    Location:209 → 555
    ATH1; Trehalose and maltose hydrolase (possible phosphorylase) [Carbohydrate transport and metabolism]
    pfam10222
    Location:16 → 297
    DUF2152; Uncharacterized conserved protein (DUF2152)

RNA

  1. XR_002812065.1 RNA Sequence

  2. XR_002812066.1 RNA Sequence

Nucleotide Protein
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