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pih1d1 PIH1 domain containing 1 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100135181, updated on 17-Aug-2024

Summary

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Official Symbol
pih1d1provided by Xenbase
Official Full Name
PIH1 domain containing 1provided by Xenbase
Primary source
Xenbase:XB-GENE-1013257
See related
Ensembl:ENSXETG00000003401
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
human mouse all
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Genomic context

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See pih1d1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
29
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 7 NC_030683.2 (112693656..113200232, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 7 NC_030683.1 (104798850..105291002, complement)

Chromosome 7 - NC_030683.2Genomic Context describing neighboring genes Neighboring gene uncharacterized protein K02A2.6 Neighboring gene prolactin, gene 2 Neighboring gene aldehyde dehydrogenase 16 family member A1 Neighboring gene uncharacterized LOC116412377 Neighboring gene fms related tyrosine kinase 3 ligand Neighboring gene excitatory amino acid transporter 2 Neighboring gene otogelin-like 2 Neighboring gene uncharacterized LOC116412081 Neighboring gene trans-1,2-dihydrobenzene-1,2-diol dehydrogenase like Neighboring gene uncharacterized LOC116412082 Neighboring gene nucleobindin-1-like Neighboring gene TUB like protein 2 Neighboring gene dihydrodiol dehydrogenase (dimeric) Neighboring gene nucleobindin-1-like Neighboring gene nucleobindin 1 Neighboring gene protein phosphatase 1 regulatory subunit 15A Neighboring gene protein phosphatase 1 regulatory subunit 15B Neighboring gene MGC79725 protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
PIH1 domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001113884.1 → NP_001107356.1  PIH1 domain-containing protein 1

    See identical proteins and their annotated locations for NP_001107356.1

    Status: PROVISIONAL

    Source sequence(s)
    BC157203
    UniProtKB/TrEMBL
    A0A803JMJ0, A9ULC5
    Conserved Domains (1) summary
    cl00175
    Location:12 → 294
    alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030683.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    112693656..113200232 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031904792.1 → XP_031760652.1  PIH1 domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A803JMJ0, F6WDA6
    Conserved Domains (2) summary
    pfam18201
    Location:210 → 295
    PIH1_CS; PIH1 CS-like domain
    cl00175
    Location:12 → 184
    alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.

  2. XM_031904791.1 → XP_031760651.1  PIH1 domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A803JMJ0, F6WDA6
    Conserved Domains (2) summary
    pfam18201
    Location:210 → 295
    PIH1_CS; PIH1 CS-like domain
    cl00175
    Location:12 → 184
    alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.

  3. XM_012965967.3 → XP_012821421.1  PIH1 domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_012821421.1

    UniProtKB/TrEMBL
    A0A803JMJ0, F6WDA6
    Conserved Domains (2) summary
    pfam18201
    Location:210 → 295
    PIH1_CS; PIH1 CS-like domain
    cl00175
    Location:12 → 184
    alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.

  4. XM_012965963.3 → XP_012821417.1  PIH1 domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_012821417.1

    UniProtKB/TrEMBL
    A0A803JMJ0, F6WDA6
    Conserved Domains (2) summary
    pfam18201
    Location:210 → 295
    PIH1_CS; PIH1 CS-like domain
    cl00175
    Location:12 → 184
    alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.

  5. XM_012965966.3 → XP_012821420.1  PIH1 domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_012821420.1

    UniProtKB/TrEMBL
    A0A803JMJ0, F6WDA6
    Conserved Domains (2) summary
    pfam18201
    Location:210 → 295
    PIH1_CS; PIH1 CS-like domain
    cl00175
    Location:12 → 184
    alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.

  6. XM_012965959.3 → XP_012821413.1  PIH1 domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_012821413.1

    UniProtKB/TrEMBL
    A0A803JMJ0, F6WDA6
    Conserved Domains (2) summary
    pfam18201
    Location:210 → 295
    PIH1_CS; PIH1 CS-like domain
    cl00175
    Location:12 → 184
    alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.

  7. XM_012965955.3 → XP_012821409.1  PIH1 domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_012821409.1

    UniProtKB/TrEMBL
    A0A803JMJ0, F6WDA6
    Conserved Domains (2) summary
    pfam18201
    Location:210 → 295
    PIH1_CS; PIH1 CS-like domain
    cl00175
    Location:12 → 184
    alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.

  8. XM_031904793.1 → XP_031760653.1  PIH1 domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A803JMJ0, F6WDA6
    Conserved Domains (2) summary
    pfam18201
    Location:210 → 295
    PIH1_CS; PIH1 CS-like domain
    cl00175
    Location:12 → 184
    alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.

  9. XM_012965968.3 → XP_012821422.1  PIH1 domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_012821422.1

    UniProtKB/TrEMBL
    A0A803JMJ0, F6WDA6
    Conserved Domains (2) summary
    pfam18201
    Location:210 → 295
    PIH1_CS; PIH1 CS-like domain
    cl00175
    Location:12 → 184
    alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.

  10. XM_012965962.3 → XP_012821416.1  PIH1 domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_012821416.1

    UniProtKB/TrEMBL
    A0A803JMJ0, F6WDA6
    Related
    ENSXETP00000007376.3, ENSXETT00000007376.4
    Conserved Domains (2) summary
    pfam18201
    Location:210 → 295
    PIH1_CS; PIH1 CS-like domain
    cl00175
    Location:12 → 184
    alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.

  11. XM_012965964.3 → XP_012821418.1  PIH1 domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_012821418.1

    UniProtKB/TrEMBL
    A0A803JMJ0, F6WDA6
    Conserved Domains (2) summary
    pfam18201
    Location:210 → 295
    PIH1_CS; PIH1 CS-like domain
    cl00175
    Location:12 → 184
    alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.

  12. XM_012965965.3 → XP_012821419.1  PIH1 domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_012821419.1

    UniProtKB/TrEMBL
    A0A803JMJ0, F6WDA6
    Conserved Domains (2) summary
    pfam18201
    Location:210 → 295
    PIH1_CS; PIH1 CS-like domain
    cl00175
    Location:12 → 184
    alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.
Nucleotide Protein Strain
Heading Accession and Version

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