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UCKL1-AS1 UCKL1 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100113386, updated on 12-Oct-2019

Summary

Official Symbol
UCKL1-AS1provided by HGNC
Official Full Name
UCKL1 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:31967
See related
Ensembl:ENSG00000280213
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
UCKL1AS; UCKL1OS; UCKL1-AS
Expression
Low expression observed in reference dataset See more
Orthologs

Genomic context

See UCKL1-AS1 in Genome Data Viewer
Location:
20q13.33
Exon count:
1
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) 20 NC_000020.11 (63953384..63956985)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (62584737..62588338)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene microRNA 1914 Neighboring gene uridine-cytidine kinase 1 like 1 Neighboring gene microRNA 647 Neighboring gene zinc finger protein 512B Neighboring gene Sharpr-MPRA regulatory region 2003 Neighboring gene sterile alpha motif domain containing 10 Neighboring gene pre-mRNA processing factor 6

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

NHGRI GWAS Catalog

Description
Identification of 23 new prostate cancer susceptibility loci using the iCOGS custom genotyping array.
NHGRI GWA Catalog

General gene information

Markers

Homology

Other Names

  • UCKL1 antisense RNA 1 (non-protein coding)
  • uridine-cytidine kinase 1-like 1 opposite strand

Clone Names

  • FLJ46647

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027287.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL118506
    Related
    ENST00000623569.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20190905

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p13 Primary Assembly

    Range
    63953384..63956985
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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