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MYOCD myocardin [ Equus caballus (horse) ]

Gene ID: 100073100, updated on 8-Mar-2024

Summary

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Official Symbol
MYOCDprovided by VGNC
Official Full Name
myocardinprovided by VGNC
Primary source
VGNC:VGNC:20515
See related
Ensembl:ENSECAG00000025166
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
15
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 11 NC_009154.3 (55252088..55346468)
102 previous assembly EquCab2.0 (GCF_000002305.2) 11 NC_009154.2 (54901335..54995563)

Chromosome 11 - NC_009154.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102148178 Neighboring gene uncharacterized LOC106782894 Neighboring gene Rho GTPase activating protein 44 Neighboring gene elaC ribonuclease Z 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in smooth muscle cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myocardin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009154.3 Reference EquCab3.0 Primary Assembly

    Range
    55252088..55346468
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014728806.2 → XP_014584292.2  myocardin isoform X2

    UniProtKB/TrEMBL
    A0A5F5PKR9
    Conserved Domains (2) summary
    smart00707
    Location:106 → 131
    RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
    pfam02037
    Location:370 → 403
    SAP; SAP domain

  2. XM_005597794.3 → XP_005597851.3  myocardin isoform X1

    UniProtKB/TrEMBL
    A0A5F5PKR9, F6SMT0
    Related
    ENSECAP00000022739.2, ENSECAT00000027176.3
    Conserved Domains (2) summary
    smart00707
    Location:106 → 131
    RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
    pfam02037
    Location:370 → 403
    SAP; SAP domain

  3. XM_014728809.2 → XP_014584295.2  myocardin isoform X3

    UniProtKB/TrEMBL
    A0A9L0SCD2, A0A9L0SZG2
    Related
    ENSECAP00000071680.1, ENSECAT00000114738.1
    Conserved Domains (2) summary
    smart00707
    Location:27 → 52
    RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
    pfam02037
    Location:291 → 324
    SAP; SAP domain
Nucleotide Protein
Heading Accession and Version

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