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NECAB2 N-terminal EF-hand calcium binding protein 2 [ Equus caballus (horse) ]

Gene ID: 100070093, updated on 8-Mar-2024

Summary

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Official Symbol
NECAB2provided by VGNC
Official Full Name
N-terminal EF-hand calcium binding protein 2provided by VGNC
Primary source
VGNC:VGNC:20652
See related
Ensembl:ENSECAG00000023746
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
14
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 3 NC_009146.3 (31998236..32027910)
102 previous assembly EquCab2.0 (GCF_000002305.2) 3 NC_009146.2 (31307973..31335285)

Chromosome 3 - NC_009146.3Genomic Context describing neighboring genes Neighboring gene malonyl-CoA decarboxylase Neighboring gene oxidative stress induced growth inhibitor 1 Neighboring gene solute carrier family 38 member 8 Neighboring gene membrane bound transcription factor peptidase, site 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of amyloid precursor protein biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-terminal EF-hand calcium-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009146.3 Reference EquCab3.0 Primary Assembly

    Range
    31998236..32027910
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023637393.1 → XP_023493161.1  N-terminal EF-hand calcium-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A5F5Q0E0
    Related
    ENSECAP00000054373.2, ENSECAT00000072940.2
    Conserved Domains (3) summary
    pfam03992
    Location:294 → 366
    ABM; Antibiotic biosynthesis monooxygenase
    pfam13499
    Location:70 → 129
    EF-hand_7; EF-hand domain pair
    cl25588
    Location:85 → 212
    NBD94; Nucleotide-Binding Domain 94 of RH

  2. XM_023637394.1 → XP_023493162.1  N-terminal EF-hand calcium-binding protein 2 isoform X2

    Conserved Domains (2) summary
    pfam13499
    Location:70 → 129
    EF-hand_7; EF-hand domain pair
    cl25588
    Location:85 → 212
    NBD94; Nucleotide-Binding Domain 94 of RH
Nucleotide Protein
Heading Accession and Version

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