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FYTTD1 forty-two-three domain containing 1 [ Equus caballus (horse) ]

Gene ID: 100060393, updated on 17-Aug-2024

Summary

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Official Symbol
FYTTD1provided by VGNC
Official Full Name
forty-two-three domain containing 1provided by VGNC
Primary source
VGNC:VGNC:18169
See related
Ensembl:ENSECAG00000019051
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 19 NC_009162.3 (36381354..36410198)

Chromosome 19 - NC_009162.3Genomic Context describing neighboring genes Neighboring gene mucin 20, cell surface associated Neighboring gene rubicon autophagy regulator Neighboring gene leucine rich repeats and calponin homology domain containing 3 Neighboring gene IQ motif containing G Neighboring gene ribosomal protein L35a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009162.3 Chromosome 19 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear speck IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UAP56-interacting factor
Names
Forty-two-three domain-containing protein 1-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009162.3 Reference EquCab3.0 Primary Assembly

    Range
    36381354..36410198
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001501465.6 → XP_001501515.1  UAP56-interacting factor

    See identical proteins and their annotated locations for XP_001501515.1

    UniProtKB/TrEMBL
    F7B5A3, K9K9N0
    Related
    ENSECAP00000016611.1, ENSECAT00000020247.3
    Conserved Domains (1) summary
    pfam07078
    Location:12 → 317
    FYTT; Forty-two-three protein
Nucleotide Protein
Heading Accession and Version

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