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SFSWAP splicing factor SWAP [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100028580, updated on 8-Mar-2024

Summary

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Gene symbol
SFSWAP
Gene description
splicing factor SWAP
See related
Ensembl:ENSMODG00000015581
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 3 NC_077229.1 (57800956..57918134)
103 previous assembly MonDom5 (GCF_000002295.2) 3 NC_008803.1 (467015986..467133053, complement)

Chromosome 3 - NC_077229.1Genomic Context describing neighboring genes Neighboring gene glutathione reductase-like Neighboring gene RING-type E3 ubiquitin-protein ligase PPIL2-like Neighboring gene matrix metallopeptidase 17 Neighboring gene unc-51 like autophagy activating kinase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mRNA 5'-splice site recognition IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
splicing factor, suppressor of white-apricot homolog
Names
splicing factor SWAP homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077229.1 Reference mMonDom1.pri

    Range
    57800956..57918134
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056821925.1 → XP_056677903.1  splicing factor, suppressor of white-apricot homolog isoform X5

  2. XM_003340766.4 → XP_003340814.3  splicing factor, suppressor of white-apricot homolog isoform X1

  3. XM_056821922.1 → XP_056677900.1  splicing factor, suppressor of white-apricot homolog isoform X2

  4. XM_056821923.1 → XP_056677901.1  splicing factor, suppressor of white-apricot homolog isoform X3

  5. XM_056821924.1 → XP_056677902.1  splicing factor, suppressor of white-apricot homolog isoform X4

  6. XM_056821926.1 → XP_056677904.1  splicing factor, suppressor of white-apricot homolog isoform X6

  7. XM_056821927.1 → XP_056677905.1  splicing factor, suppressor of white-apricot homolog isoform X6

  8. XM_056821928.1 → XP_056677906.1  splicing factor, suppressor of white-apricot homolog isoform X7

Nucleotide Protein
Heading Accession and Version

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