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HTR1B 5-hydroxytryptamine receptor 1B [ Equus caballus (horse) ]

Gene ID: 100009680, updated on 17-Aug-2024

Summary

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Official Symbol
HTR1Bprovided by VGNC
Official Full Name
5-hydroxytryptamine receptor 1Bprovided by VGNC
Primary source
VGNC:VGNC:111891
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 10 NC_009153.3 (32463232..32464670, complement)

Chromosome 10 - NC_009153.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111775482 Neighboring gene CDGSH iron-sulfur domain-containing protein 1 pseudogene Neighboring gene tigger transposable element-derived protein 1-like Neighboring gene meiotic double-stranded break formation protein 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009153.3 Chromosome 10 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. SNP detection and radiation hybrid mapping in horses of nine candidate genes for temperament. Momozawa Y, et al. Anim Genet, 2007 Feb. PMID 17257195
  2. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled serotonin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables dopamine neurotransmitter receptor activity, coupled via Gs IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled dopamine receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in adenylate cyclase-activating adrenergic receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in bone remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of behavior IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vasoconstriction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
5-hydroxytryptamine receptor 1B
Names
5-HT-1B
5-HT1B
serotonin receptor 1B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001081779.1 → NP_001075248.1  5-hydroxytryptamine receptor 1B

    See identical proteins and their annotated locations for NP_001075248.1

    Status: VALIDATED

    Source sequence(s)
    AB264326
    UniProtKB/Swiss-Prot
    Q0EAB5
    Conserved Domains (2) summary
    pfam00001
    Location:67 → 369
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:59 → 186
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009153.3 Reference EquCab3.0 Primary Assembly

    Range
    32463232..32464670 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q0EAB5.1 GenPept UniProtKB/Swiss-Prot:Q0EAB5

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials