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    ZDHHC17 zinc finger DHHC-type palmitoyltransferase 17 [ Bos taurus (cattle) ]

    Gene ID: 541172, updated on 5-Mar-2024

    Summary

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    Official Symbol
    ZDHHC17provided by VGNC
    Official Full Name
    zinc finger DHHC-type palmitoyltransferase 17provided by VGNC
    Primary source
    VGNC:VGNC:37132
    See related
    BGD:BT17282; Ensembl:ENSBTAG00000021756
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (6174737..6275214)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene oxysterol binding protein like 8 Neighboring gene uncharacterized LOC132345377 Neighboring gene U7 small nuclear RNA Neighboring gene cysteine and glycine rich protein 2 Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables palmitoyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein palmitoylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    palmitoyltransferase ZDHHC17
    Names
    zinc finger DHHC-type containing 17
    NP_001192998.1
    XP_010803034.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001206069.1 → NP_001192998.1  palmitoyltransferase ZDHHC17

      See identical proteins and their annotated locations for NP_001192998.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000005
      UniProtKB/TrEMBL
      E1BJK1
      Related
      ENSBTAP00000076588.1, ENSBTAT00000098243.1
      Conserved Domains (3) summary
      cd00204
      Location:87 → 202
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:156 → 187
      ANK; ANK repeat [structural motif]
      pfam01529
      Location:438 → 568
      zf-DHHC; DHHC palmitoyltransferase

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      6174737..6275214
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010804732.4 → XP_010803034.1  palmitoyltransferase ZDHHC17 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LTI4
      Related
      ENSBTAP00000092910.1, ENSBTAT00000096432.1
      Conserved Domains (6) summary
      cd00204
      Location:87 → 202
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam01529
      Location:438 → 540
      zf-DHHC; DHHC palmitoyltransferase
      pfam12796
      Location:161 → 255
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:70 → 110
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:156 → 187
      ANK; ANK repeat [structural motif]
      cl19890
      Location:358 → 474
      zf-DHHC; DHHC palmitoyltransferase
    Nucleotide Protein Strain
    Heading Accession and Version

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