ZNF850 zinc finger protein 850 [Pan troglodytes (chimpanzee)] - Gene

Summary

Gene symbol: ZNF850
Gene description: zinc finger protein 850
Locus tag: CK820_G0030294
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as: ZNF850P
Orthologs: human all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 20

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	20	NC_072418.2 (39902081..39929560)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	19	NC_072417.1 (39902114..39929587)

Chromosome 20 - NC_072418.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Markers

GDB:434012 (e-PCR)
- UniSTS:157204

D10S275 (e-PCR)
- UniSTS:147992

D11S2560 (e-PCR)
- UniSTS:37928

PMC156606P1 (e-PCR)
- UniSTS:271408

PMC156606P3 (e-PCR)
- UniSTS:271410

D8S2278 (e-PCR)
- UniSTS:473906

PMC156606P4 (e-PCR)
- UniSTS:271411

D8S2279 (e-PCR)
- UniSTS:473907

D1S1423 (e-PCR)
- UniSTS:149619

D11S3114 (e-PCR)
- UniSTS:152207

L18441 (e-PCR)
- UniSTS:71348

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific	IEA Inferred from Electronic Annotation more info	PubMed
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in regulation of transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

Go to the top of the page Help

Preferred Names: putative zinc finger protein ENSP00000330994; zinc finger protein 850

Names: zinc finger protein 850 pseudogene

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072418.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

39902081..39929560

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_016935782.4 → XP_016791271.2 zinc finger protein 850 isoform X1

UniProtKB/TrEMBL

A0A2J8QI39

Conserved Domains (5) summary

smart00349
Location:7 → 67

KRAB; krueppel associated box

COG5048
Location:531 → 947

COG5048; FOG: Zn-finger [General function prediction only]

COG5189
Location:1005 → 1083

SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

sd00017
Location:899 → 919

ZF_C2H2; C2H2 Zn finger [structural motif]

pfam13465
Location:967 → 992

zf-H2C2_2; Zinc-finger double domain
XM_016935784.4 → XP_016791273.2 zinc finger protein 850 isoform X2

UniProtKB/TrEMBL

A0A2J8QI51

Conserved Domains (5) summary

COG5048
Location:499 → 915

COG5048; FOG: Zn-finger [General function prediction only]

COG5189
Location:973 → 1051

SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

sd00017
Location:867 → 887

ZF_C2H2; C2H2 Zn finger [structural motif]

pfam01352
Location:6 → 47

KRAB; KRAB box

pfam13465
Location:935 → 960

zf-H2C2_2; Zinc-finger double domain
XM_016935783.3 → XP_016791272.2 zinc finger protein 850 isoform X1

UniProtKB/TrEMBL

A0A2J8QI39

Conserved Domains (5) summary

smart00349
Location:7 → 67

KRAB; krueppel associated box

COG5048
Location:531 → 947

COG5048; FOG: Zn-finger [General function prediction only]

COG5189
Location:1005 → 1083

SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

sd00017
Location:899 → 919

ZF_C2H2; C2H2 Zn finger [structural motif]

pfam13465
Location:967 → 992

zf-H2C2_2; Zinc-finger double domain