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CSNK1A1 casein kinase 1 alpha 1 [ Gallus gallus (chicken) ]

Gene ID: 395924, updated on 17-Aug-2024

Summary

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Official Symbol
CSNK1A1provided by CGNC
Official Full Name
casein kinase 1 alpha 1provided by CGNC
Primary source
CGNC:49554
See related
Ensembl:ENSGALG00010011991
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
CSNK1A1L
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
11
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 13 NC_052544.1 (8069109..8102875)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 13 NC_052585.1 (8074620..8107985)

Chromosome 13 - NC_052544.1Genomic Context describing neighboring genes Neighboring gene PPARG coactivator 1 beta Neighboring gene Rho guanine nucleotide exchange factor 37 Neighboring gene uncharacterized LOC112533410 Neighboring gene microRNA mir-145 Neighboring gene microRNA mir-143

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of four alternatively spliced isoforms of chicken casein kinase I alpha that are all expressed in diverse cell types. Green CL, et al. Gene, 1998 Aug 17. PMID 9766967
  2. Chicken genomics resource: sequencing and annotation of 35,407 ESTs from single and multiple tissue cDNA libraries and CAP3 assembly of a chicken gene index. Carre W, et al. Physiol Genomics, 2006 May 16. PMID 16554550
  3. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392
  4. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-serine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
casein kinase I isoform alpha; casein kinase I
Names
CK1
CKI-alpha
casein kinase 1 alpha 1 like
casein kinase I alpha LS
NP_990384.1
XP_015149158.1
XP_015149159.1
XP_015149160.1
XP_046782801.1
XP_046782802.1
XP_046782803.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_205053.2 → NP_990384.1  casein kinase I isoform alpha

    See identical proteins and their annotated locations for NP_990384.1

    Status: VALIDATED

    Source sequence(s)
    AF042863, AJ446617, AJ728829, AJ728830, AJ728831, AL584120, BI067393, BU284176, CB016751, CR387289, U80822
    UniProtKB/TrEMBL
    F1NL64
    Related
    ENSGALP00010016506.1, ENSGALT00010028703.1
    Conserved Domains (1) summary
    cd14128
    Location:16 → 309
    STKc_CK1_alpha; Catalytic domain of the Serine/Threonine protein kinases, Casein Kinase 1 alpha

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052544.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    8069109..8102875
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015293672.4 → XP_015149158.1  casein kinase I isoform X1

    UniProtKB/Swiss-Prot
    P67962
    UniProtKB/TrEMBL
    F1NL64
    Conserved Domains (1) summary
    cd14128
    Location:16 → 309
    STKc_CK1_alpha; Catalytic domain of the Serine/Threonine protein kinases, Casein Kinase 1 alpha

  2. XM_015293673.4 → XP_015149159.1  casein kinase I isoform X2

    UniProtKB/Swiss-Prot
    P67962
    Conserved Domains (1) summary
    cd14128
    Location:16 → 281
    STKc_CK1_alpha; Catalytic domain of the Serine/Threonine protein kinases, Casein Kinase 1 alpha

  3. XM_015293674.4 → XP_015149160.1  casein kinase I isoform X3

    UniProtKB/TrEMBL
    Q71UZ3
    Related
    ENSGALP00010016517.1, ENSGALT00010028715.1
    Conserved Domains (1) summary
    cd14128
    Location:16 → 281
    STKc_CK1_alpha; Catalytic domain of the Serine/Threonine protein kinases, Casein Kinase 1 alpha

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052585.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    8074620..8107985
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046926845.1 → XP_046782801.1  casein kinase I isoform X1

  2. XM_046926846.1 → XP_046782802.1  casein kinase I isoform X2

    UniProtKB/Swiss-Prot
    P67962

  3. XM_046926847.1 → XP_046782803.1  casein kinase I isoform X3

    UniProtKB/TrEMBL
    Q71UZ3
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P67962.1 GenPept UniProtKB/Swiss-Prot:P67962

Gene LinkOut

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