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RNF213 ring finger protein 213 [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105469385, updated on 13-Mar-2024

Summary

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Gene symbol
RNF213
Gene description
ring finger protein 213
See related
Ensembl:ENSMNEG00000030107
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
65
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012013910.1 (17199872..17344459)

NW_012013910.1Genomic Context describing neighboring genes Neighboring gene caspase recruitment domain family member 14 Neighboring gene solute carrier family 26 member 11 Neighboring gene N-sulfoglucosamine sulfohydrolase Neighboring gene uncharacterized LOC112424528 Neighboring gene endonuclease V

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012013910 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of non-canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sprouting angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RNF213

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012013910.1 Reference Mnem_1.0

    Range
    17199872..17344459
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011720328.2 → XP_011718630.1  E3 ubiquitin-protein ligase RNF213

    UniProtKB/TrEMBL
    A0A2K6BJZ4
    Related
    ENSMNEP00000011721.1, ENSMNET00000035913.1
    Conserved Domains (5) summary
    cd00009
    Location:2437 → 2548
    AAA; The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, ...
    smart00382
    Location:2435 → 2548
    AAA; ATPases associated with a variety of cellular activities
    PHA03169
    Location:6 → 261
    PHA03169; hypothetical protein; Provisional
    cd00162
    Location:4017 → 4059
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
    pfam05466
    Location:181 → 351
    BASP1; Brain acid soluble protein 1 (BASP1 protein)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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