U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 [ Nipponia nippon (crested ibis) ]

Gene ID: 104012357, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
TANC1
Gene description
tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
Locus tag
Y956_01749
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Nipponia
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_009000214.1 (2011879..2069884)

NW_009000214.1Genomic Context describing neighboring genes Neighboring gene plakophilin 4 Neighboring gene death associated protein like 1 Neighboring gene WD repeat, sterile alpha motif and U-box domain containing 1 Neighboring gene bromodomain adjacent to zinc finger domain 2B

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_009000214.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of postsynapse organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in glutamatergic synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein TANC1
Names
Protein TANC1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_009000214.1 Reference ASM70822v1 Primary Assembly

    Range
    2011879..2069884
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009464728.1 → XP_009463003.1  protein TANC1

    UniProtKB/TrEMBL
    A0A091V2Y6
    Conserved Domains (8) summary
    cd00204
    Location:1082 → 1207
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00006
    Location:1235 → 1260
    TPR; TPR repeat [structural motif]
    pfam12796
    Location:1059 → 1151
    Ank_2; Ankyrin repeats (3 copies)
    pfam13191
    Location:328 → 370
    AAA_16; AAA ATPase domain
    pfam13414
    Location:1233 → 1310
    TPR_11; TPR repeat
    pfam13428
    Location:1314 → 1356
    TPR_14; Tetratricopeptide repeat
    pfam13637
    Location:881 → 930
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:1088 → 1118
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.