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Ankrd13c ankyrin repeat domain 13C [ Peromyscus maniculatus bairdii (prairie deer mouse) ]

Gene ID: 102904826, updated on 10-Mar-2024

Summary

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Gene symbol
Ankrd13c
Gene description
ankyrin repeat domain 13C
See related
Ensembl:ENSPEMG00000016958
Gene type
protein coding
RefSeq status
MODEL
Organism
Peromyscus maniculatus bairdii (sub-species: bairdii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
14
Annotation release Status Assembly Chr Location
102 current HU_Pman_2.1.3 (GCF_003704035.1) 6 NC_056013.1 (133452976..133505066)
101 previous assembly Pman_1.0 (GCF_000500345.1) Unplaced Scaffold NW_006501088.1 (1039571..1091222, complement)

Chromosome 6 - NC_056013.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121830545 Neighboring gene cystathionine gamma-lyase Neighboring gene uncharacterized LOC121830382 Neighboring gene serine and arginine rich splicing factor 11 Neighboring gene 40S ribosomal protein S26-like Neighboring gene leucine rich repeat containing 40

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat domain-containing protein 13C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Peromyscus maniculatus bairdii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HU_Pman_2.1.3 Primary Assembly

Genomic

  1. NC_056013.1 Reference HU_Pman_2.1.3 Primary Assembly

    Range
    133452976..133505066
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042280202.1 → XP_042136136.1  ankyrin repeat domain-containing protein 13C isoform X3

    Conserved Domains (2) summary
    PHA02875
    Location:116 → 199
    PHA02875; ankyrin repeat protein; Provisional
    sd00045
    Location:116 → 142
    ANK; ANK repeat [structural motif]

  2. XM_006974905.3 → XP_006974967.1  ankyrin repeat domain-containing protein 13C isoform X1

    UniProtKB/TrEMBL
    A0A6I9L1H7
    Related
    ENSPEMP00000018316.1
    Conserved Domains (3) summary
    sd00045
    Location:116 → 142
    ANK; ANK repeat [structural motif]
    pfam11904
    Location:260 → 533
    GPCR_chapero_1; GPCR-chaperone
    pfam12796
    Location:118 → 200
    Ank_2; Ankyrin repeats (3 copies)

  3. XM_015993796.2 → XP_015849282.1  ankyrin repeat domain-containing protein 13C isoform X2

    UniProtKB/TrEMBL
    A0A6J0D748
    Conserved Domains (4) summary
    cd00204
    Location:116 → 186
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam11904
    Location:246 → 519
    GPCR_chapero_1; GPCR-chaperone
    pfam12796
    Location:140 → 186
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:116 → 142
    ANK; ANK repeat [structural motif]

  4. XM_042280203.1 → XP_042136137.1  ankyrin repeat domain-containing protein 13C isoform X4

    Conserved Domains (2) summary
    pfam11904
    Location:107 → 380
    GPCR_chapero_1; GPCR-chaperone
    cl39094
    Location:1 → 55
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein
Heading Accession and Version

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