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    LOC17878751 GDSL esterase/lipase 1 [ Capsella rubella ]

    Gene ID: 17878751, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC17878751
    Gene description
    GDSL esterase/lipase 1
    Locus tag
    CARUB_v10007566mg
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Capsella rubella
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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    Genomic context

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    See LOC17878751 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current Caprub1_0 (GCF_000375325.1) Unplaced Scaffold NW_006238917.1 (15734613..15736250, complement)

    NW_006238917.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC17879968 Neighboring gene uncharacterized LOC111829338 Neighboring gene putative F-box/LRR-repeat protein 23 Neighboring gene uncharacterized LOC17877810 Neighboring gene uncharacterized LOC17881037

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006238917 Unplaced Scaffold Reference Caprub1_0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables lipase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GDSL esterase/lipase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Capsella rubella Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Caprub1_0

    Genomic

    1. NW_006238917.1 Reference Caprub1_0

      Range
      15734613..15736250 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006285975.2 → XP_006286037.1  GDSL esterase/lipase 1

      See identical proteins and their annotated locations for XP_006286037.1

      UniProtKB/TrEMBL
      R0H2Q1
      Conserved Domains (1) summary
      cd01837
      Location:39 → 360
      SGNH_plant_lipase_like; SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all ...
    Nucleotide Protein
    Heading Accession and Version

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