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    Dok6 docking protein 6 [ Mus musculus (house mouse) ]

    Gene ID: 623279, updated on 11-Apr-2024

    Summary

    Official Symbol
    Dok6provided by MGI
    Official Full Name
    docking protein 6provided by MGI
    Primary source
    MGI:MGI:3639495
    See related
    Ensembl:ENSMUSG00000073514 AllianceGenome:MGI:3639495
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Dok-6
    Summary
    Predicted to be involved in positive regulation of MAPK cascade and transmembrane receptor protein tyrosine kinase signaling pathway. Predicted to be active in cytoplasm. Is expressed in several structures, including central nervous system; dorsal root ganglion; and ureteric tip. Orthologous to human DOK6 (docking protein 6). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in frontal lobe adult (RPKM 4.5), cortex adult (RPKM 4.0) and 5 other tissues See more
    Orthologs
    NEW
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    Genomic context

    Location:
    18 E4; 18 59.05 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (89310547..89787664, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (89292423..89769540, complement)

    Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene microRNA 6359 Neighboring gene rotatin Neighboring gene CD226 antigen Neighboring gene CapStarr-seq enhancer MGSCv37_chr18:89509927-89510110 Neighboring gene predicted gene, 18279 Neighboring gene STARR-seq mESC enhancer starr_45304 Neighboring gene STARR-seq mESC enhancer starr_45305 Neighboring gene predicted gene, 41800 Neighboring gene tubulin, beta 4 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in Ras protein signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cell surface receptor protein tyrosine kinase signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of MAPK cascade IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    docking protein 6
    Names
    downstream of tyrosine kinase 6
    downstream of tyrosine kinases 6

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001039173.2NP_001034262.1  docking protein 6

      See identical proteins and their annotated locations for NP_001034262.1

      Status: VALIDATED

      Source sequence(s)
      AC110375, AC116387, AC116877, AC164619
      Consensus CDS
      CCDS37878.1
      UniProtKB/Swiss-Prot
      B2RSP9, Q2MHE5
      Related
      ENSMUSP00000095103.4, ENSMUST00000097495.5

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000084.7 Reference GRCm39 C57BL/6J

      Range
      89310547..89787664 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)