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Sample GSM1305238 Query DataSets for GSM1305238
Status Public on Apr 24, 2014
Title Animal 1; p11c [Day 42]
Sample type RNA
 
Source name peripheral blood
Organism Macaca mulatta
Characteristics animal id: 107-2006
cell type: p11c
time: Day 42
Extracted molecule total RNA
Extraction protocol RNA was extracted following standard Illumina protocol
Label biotin
Label protocol RNA was labeled following standard Illumina protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina hybridization protocol
Description Animal 1 p11c
plasma viral RNA
Sample 5
Data processing The data were normalized using qualtile normalization with Bioinformatics Toolbox in Matlab
 
Submission date Jan 10, 2014
Last update date Apr 24, 2014
Contact name Hsun-Hsien Chang
Organization name Harvard Medical School
Department Children's Hospital Informatics Department
Street address 300 Longwood Ave
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platform ID GPL6947
Series (1)
GSE54001 Role of TCR:peptide/MHC Class I Affinity in Directing Different Maturation Phenotypes of Dominant and Subdominant Epitope-Specific CD8+ T Cells in Mamu-A*01+ Rhesus Monkeys

Data table header descriptions
ID_REF
VALUE quantile-normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1343291 31802.30049 0
ILMN_1343295 818.5573685 0
ILMN_1651199 99.64836363 0.3754941
ILMN_1651209
ILMN_1651210 96.49417875 0.5164691
ILMN_1651221 90.05903832 0.7483531
ILMN_1651228 216.6988097 0
ILMN_1651229 117.5339104 0.03820817
ILMN_1651230 154.4345535 0.003952569
ILMN_1651232 120.4676884 0.02766798
ILMN_1651235 98.27524244 0.43083
ILMN_1651236 100.3041792 0.342556
ILMN_1651237 108.977781 0.1146245
ILMN_1651238 90.11133011 0.7483531
ILMN_1651249
ILMN_1651253 94.44627086 0.5968379
ILMN_1651254 711.0767393 0
ILMN_1651259 86.3125466 0.8142292
ILMN_1651260
ILMN_1651262 5155.087029 0

Total number of rows: 48803

Table truncated, full table size 1503 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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