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    LOC100121980 39S ribosomal protein L41, mitochondrial [ Nasonia vitripennis (jewel wasp) ]

    Gene ID: 100121980, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC100121980
    Gene description
    39S ribosomal protein L41, mitochondrial
    See related
    NASONIABASE:NV10724
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nasonia vitripennis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Chalcidoidea; Pteromalidae; Pteromalinae; Nasonia
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    Genomic context

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    See LOC100121980 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    104 current Nvit_psr_1.1 (GCF_009193385.2) 5 Unlocalized Scaffold NC_045761.1 (25742287..25747874)
    103 previous assembly Nvit_psr_1 (GCF_009193385.1) 5 Unlocalized Scaffold NW_022279649.1 (2522647..2527165, complement)

    Chromosome 5 - NC_045761.1Genomic Context describing neighboring genes Neighboring gene A-kinase anchor protein 17A Neighboring gene putative ATP-dependent RNA helicase DHX57 Neighboring gene putative ATP-dependent RNA helicase DHX57 Neighboring gene MAP/microtubule affinity-regulating kinase 4 Neighboring gene uncharacterized LOC103316275

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Werren JH, et al. Science, 2010 Jan 15. PMID 20075255, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in intracellular anatomical structure IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of mitochondrial large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    39S ribosomal protein L41, mitochondrial; putative ATP-dependent RNA helicase DHX57

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nasonia vitripennis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Nvit_psr_1.1

    Genomic

    1. NC_045761.1 Reference Nvit_psr_1.1

      Range
      25742287..25747874
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001605532.6 → XP_001605582.2  putative ATP-dependent RNA helicase DHX57 isoform X1

      UniProtKB/TrEMBL
      A0A7M7G6X4
      Conserved Domains (5) summary
      smart00487
      Location:166 → 350
      DEXDc; DEAD-like helicases superfamily
      smart00847
      Location:653 → 736
      HA2; Helicase associated domain (HA2) Add an annotation
      cd00046
      Location:176 → 317
      DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
      pfam07717
      Location:777 → 911
      OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold
      cl21455
      Location:463 → 530
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    2. XM_032600316.1 → XP_032456207.1  39S ribosomal protein L41, mitochondrial isoform X2

      UniProtKB/TrEMBL
      A0A7M7R278
      Conserved Domains (1) summary
      pfam09809
      Location:21 → 140
      MRP-L27; Mitochondrial ribosomal protein L27
    Nucleotide Protein Strain
    Heading Accession and Version

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