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    AT4G31110 Wall-associated kinase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829238, updated on 15-Feb-2024

    Summary

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    Gene symbol
    AT4G31110
    Gene description
    Wall-associated kinase family protein
    Primary source
    Araport:AT4G31110
    Locus tag
    AT4G31110
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F6E21.30; F6E21_30
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (15127045..15130021)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene integral membrane metal-binding family protein (DUF2296) Neighboring gene wall-associated kinase Neighboring gene DUF1997 family protein, putative (DUF1997) Neighboring gene SHK1 binding protein 1 Neighboring gene keratin-associated protein (DUF1218)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198
    3. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001342055.1
    NM_119261.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables polysaccharide binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in cell surface receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Wall-associated kinase family protein
    NP_194840.3
    • Wall-associated kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Wall-associated kinase (InterPro:IPR013695), EGF-like calcium-binding, conserved site (InterPro:IPR018097), Protein kinase, catalytic domain (InterPro:IPR000719), EGF calcium-binding (InterPro:IPR013091), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: wall-associated kinase, putative (TAIR:AT4G31100.1); Has 121460 Blast hits to 119275 proteins in 4421 species: Archae - 129; Bacteria - 13486; Metazoa - 45601; Fungi - 10420; Plants - 33407; Viruses - 489; Other Eukaryotes - 17928 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      15127045..15130021
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119261.4 → NP_194840.3  Wall-associated kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194840.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WNY5, Q9M091
      UniProtKB/TrEMBL
      A0A178UXW5, A0A5S9XXJ5
      Conserved Domains (4) summary
      smart00221
      Location:456 → 721
      STYKc; Protein kinase; unclassified specificity
      pfam08488
      Location:207 → 316
      WAK; Wall-associated kinase
      cd14066
      Location:459 → 728
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam13947
      Location:29 → 151
      GUB_WAK_bind; Wall-associated receptor kinase galacturonan-binding

    2. NM_001342055.1 → NP_001329355.1  Wall-associated kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UXW5, A0A1P8B7G4, A0A5S9XXJ5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0WNY5.1

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