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    dhx9 DEAH (Asp-Glu-Ala-His) box helicase 9 [ Poecilia formosa (Amazon molly) ]

    Gene ID: 103156146, updated on 11-Mar-2024

    Summary

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    Gene symbol
    dhx9
    Gene description
    DEAH (Asp-Glu-Ala-His) box helicase 9
    See related
    Ensembl:ENSPFOG00000019152
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Poecilia formosa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
    Orthologs
    human zebrafish all
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    Genomic context

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    See dhx9 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006800405.1 (250454..264373)

    NW_006800405.1Genomic Context describing neighboring genes Neighboring gene nicotinamide nucleotide adenylyltransferase 2 Neighboring gene laminin, gamma 2 Neighboring gene laminin, gamma 1 Neighboring gene RAS protein activator like 2 Neighboring gene uncharacterized LOC107833836

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006800405.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3'-5' DNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables 3'-5' DNA/RNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables double-stranded RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of mRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in intracellular anatomical structure IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATP-dependent RNA helicase A
    Names
    DEAH-box helicase 9
    DExH-box helicase 9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Poecilia_formosa-5.1.2

    Genomic

    1. NW_006800405.1 Reference Poecilia_formosa-5.1.2

      Range
      250454..264373
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007578097.2 → XP_007578159.1  ATP-dependent RNA helicase A isoform X1

      UniProtKB/TrEMBL
      A0A087YML9
      Related
      ENSPFOP00000019272.2, ENSPFOT00000019294.2
      Conserved Domains (6) summary
      smart00358
      Location:5 → 69
      DSRM; Double-stranded RNA binding motif
      smart00847
      Location:846 → 926
      HA2; Helicase associated domain (HA2) Add an annotation
      COG1643
      Location:384 → 1059
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
      cd00046
      Location:414 → 554
      DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
      pfam00271
      Location:642 → 775
      Helicase_C; Helicase conserved C-terminal domain
      pfam07717
      Location:966 → 1078
      OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold

    2. XM_016664079.1 → XP_016519565.1  ATP-dependent RNA helicase A isoform X2

      UniProtKB/TrEMBL
      A0A087YML9
    Nucleotide Protein
    Heading Accession and Version

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