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    gnmt glycine N-methyltransferase [ Oryzias latipes (Japanese medaka) ]

    Gene ID: 101154832, updated on 8-Mar-2024

    Summary

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    Gene symbol
    gnmt
    Gene description
    glycine N-methyltransferase
    See related
    EnsemblRapid:ENSORLG00000023048
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryzias latipes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
    Orthologs
    human zebrafish all
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    Genomic context

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    Location:
    chromosome: 22
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current ASM223467v1 (GCF_002234675.1) 22 NC_019880.2 (17829750..17836757, complement)
    102 previous assembly ASM31367v1 (GCF_000313675.1) Unplaced Scaffold NW_004089528.1 (131495..139314, complement)

    Chromosome 22 - NC_019880.2Genomic Context describing neighboring genes Neighboring gene synaptotagmin XIVa Neighboring gene SERTA domain-containing protein 4 Neighboring gene complement component C1q receptor Neighboring gene calpain-2 catalytic subunit

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables S-adenosyl-L-methionine binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables glycine N-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables glycine binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables identical protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in S-adenosylhomocysteine metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in S-adenosylmethionine metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in one-carbon metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein homotetramerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of gluconeogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sarcosine metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glycine N-methyltransferase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM223467v1 Primary Assembly

    Genomic

    1. NC_019880.2 Reference ASM223467v1 Primary Assembly

      Range
      17829750..17836757 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004084448.4 → XP_004084496.1  glycine N-methyltransferase

      UniProtKB/TrEMBL
      A0A3B3H9X6, A0A3P9JEI3, A0A3P9L7D3
      Related
      ENSORLP00000028631.1, ENSORLT00000042207.2
      Conserved Domains (1) summary
      pfam12847
      Location:61 → 177
      Methyltransf_18; Methyltransferase domain
    Nucleotide Protein
    Heading Accession and Version

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