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    parp142.2 poly(ADP-ribose) polymerase family member 14-related sequence 2.2 [ Danio rerio (zebrafish) ]

    Gene ID: 101885359, updated on 27-Mar-2024

    Summary

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    Official Symbol
    parp142.2provided by ZNC
    Official Full Name
    poly(ADP-ribose) polymerase family member 14-related sequence 2.2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-160114-55
    See related
    Ensembl:ENSDARG00000099377 AllianceGenome:ZFIN:ZDB-GENE-160114-55
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    parp14b3; si:cabz01030277.1
    Summary
    Predicted to enable NAD+ ADP-ribosyltransferase activity. [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    Location:
    chromosome: 7
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (7952413..7984099, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (7706472..7738131, complement)

    Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108190774 Neighboring gene poly [ADP-ribose] polymerase 14-like Neighboring gene poly(ADP-ribose) polymerase family member 14-related sequence 2.1 Neighboring gene uncharacterized LOC108190755

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. IFN-Stimulated Genes in Zebrafish and Humans Define an Ancient Arsenal of Antiviral Immunity. Levraud JP, et al. J Immunol, 2019 Dec 15. PMID 31732531
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    3. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables NAD+ ADP-ribosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glycosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables pentosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    poly [ADP-ribose] polymerase 14-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007118.7 Reference GRCz11 Primary Assembly

      Range
      7952413..7984099 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005166355.4 → XP_005166412.1  poly [ADP-ribose] polymerase 14-like

      UniProtKB/TrEMBL
      A0A8M2BDY0
      Related
      ENSDARP00000133131.1, ENSDART00000163203.3
      Conserved Domains (4) summary
      cd01439
      Location:1259 → 1376
      TCCD_inducible_PARP_like; Poly(ADP-ribose) polymerases catalyse the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ...
      pfam00644
      Location:1200 → 1377
      PARP; Poly(ADP-ribose) polymerase catalytic domain
      cl00019
      Location:791 → 917
      Macro; Macro domain, a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ...
      cl17169
      Location:26 → 76
      RRM_SF; RNA recognition motif (RRM) superfamily
    Nucleotide Protein
    Heading Accession and Version

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