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    RUS3 root UVB sensitive protein (Protein of unknown function, DUF647) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837937, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RUS3
    Official Full Name
    root UVB sensitive protein (Protein of unknown function, DUF647)
    Primary source
    TAIR:AT1G13770
    Locus tag
    AT1G13770
    See related
    Araport:AT1G13770
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F21F23.21; F21F23_21; ROOT UV-B SENSITIVE 3
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    14
    Sequence:
    Chromosome: 1; NC_003070.9 (4721574..4724520)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Defensin-like (DEFL) family protein Neighboring gene uncharacterized protein Neighboring gene F-box/RNI-like/FBD-like domains-containing protein Neighboring gene XH/XS domain-containing protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. ROOT UV-B SENSITIVE2 acts with ROOT UV-B SENSITIVE1 in a root ultraviolet B-sensing pathway. Leasure CD, et al. Plant Physiol, 2009 Aug. PMID 19515790, Free PMC Article
    2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    3. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001123808.2
    NM_001332085.1
    NM_001332086.1
    NM_101245.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    root UVB sensitive protein (Protein of unknown function, DUF647)
    NP_001117280.1
    • ROOT UV-B SENSITIVE 3 (RUS3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT3G45890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_172832.3
    • ROOT UV-B SENSITIVE 3 (RUS3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT3G45890.1); Has 450 Blast hits to 446 proteins in 132 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 75; Plants - 194; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      4721574..4724520
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001123808.2 → NP_001117280.1  root UVB sensitive protein (Protein of unknown function, DUF647) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001117280.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9UA36
      Conserved Domains (1) summary
      pfam04884
      Location:2 → 196
      DUF647; Vitamin B6 photo-protection and homoeostasis

    2. NM_001332085.1 → NP_001320201.1  root UVB sensitive protein (Protein of unknown function, DUF647) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AM33, A0A7G2DWL0
      Conserved Domains (1) summary
      pfam04884
      Location:45 → 283
      DUF647; Vitamin B6 photo-protection and homoeostasis

    3. NM_101245.5 → NP_172832.3  root UVB sensitive protein (Protein of unknown function, DUF647) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172832.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B3H4U4, Q84JB8, Q9LMX1
      UniProtKB/TrEMBL
      A0A178WJD5, A0A5S9UA36
      Conserved Domains (1) summary
      pfam04884
      Location:45 → 283
      DUF647; Vitamin B6 photo-protection and homoeostasis

    4. NM_001332086.1 → NP_001320202.1  root UVB sensitive protein (Protein of unknown function, DUF647) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AM66
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q84JB8.1

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