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    Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 [ Mus musculus (house mouse) ]

    Gene ID: 77134, updated on 9-Sep-2018

    Summary

    Official Symbol
    Hnrnpa0provided by MGI
    Official Full Name
    heterogeneous nuclear ribonucleoprotein A0provided by MGI
    Primary source
    MGI:MGI:1924384
    See related
    Ensembl:ENSMUSG00000007836
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Hnrpa0; hnRNP A0; 1110055B05Rik; 3010025E17Rik
    Orthologs

    Genomic context

    See Hnrnpa0 in Genome Data Viewer
    Location:
    13; 13 B1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 13 NC_000079.6 (58125879..58128556, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (58227240..58229917, complement)

    Chromosome 13 - NC_000079.6Genomic Context describing neighboring genes Neighboring gene kelch-like 3 Neighboring gene microRNA 874 Neighboring gene predicted gene, 33389 Neighboring gene predicted gene, 40964 Neighboring gene RIKEN cDNA 1700066J03 gene

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    AU-rich element binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    AU-rich element binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    AU-rich element binding ISO
    Inferred from Sequence Orthology
    more info
     
    RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    mRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein kinase binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    3'-UTR-mediated mRNA stabilization IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    3'-UTR-mediated mRNA stabilization IDA
    Inferred from Direct Assay
    more info
    PubMed 
    inflammatory response IDA
    Inferred from Direct Assay
    more info
    PubMed 
    response to lipopolysaccharide IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    ribonucleoprotein complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    heterogeneous nuclear ribonucleoprotein A0

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_029872.1NP_084148.1  heterogeneous nuclear ribonucleoprotein A0

      See identical proteins and their annotated locations for NP_084148.1

      Status: VALIDATED

      Source sequence(s)
      AC165251
      Consensus CDS
      CCDS49280.1
      UniProtKB/Swiss-Prot
      Q9CX86
      Related
      ENSMUSP00000007980.6, ENSMUST00000007980.6
      Conserved Domains (3) summary
      cd12326
      Location:583
      RRM1_hnRNPA0; RNA recognition motif 1 found in heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0) and similar proteins
      pfam11627
      Location:253272
      HnRNPA1; Nuclear factor hnRNPA1
      cl17169
      Location:99178
      RRM_SF; RNA recognition motif (RRM) superfamily

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000079.6 Reference GRCm38.p4 C57BL/6J

      Range
      58125879..58128556 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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