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    Armc1 armadillo repeat containing 1 [ Mus musculus (house mouse) ]

    Gene ID: 74252, updated on 31-Jan-2019

    Summary

    Official Symbol
    Armc1provided by MGI
    Official Full Name
    armadillo repeat containing 1provided by MGI
    Primary source
    MGI:MGI:1921502
    See related
    Ensembl:ENSMUSG00000027599
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Arcp; AA409258; AW048872; 2310016N05Rik; 2900046P06Rik; 3110009G21Rik; C330014L16Rik
    Expression
    Broad expression in CNS E18 (RPKM 11.8), bladder adult (RPKM 11.4) and 25 other tissues See more
    Orthologs

    Genomic context

    See Armc1 in Genome Data Viewer
    Location:
    3; 3 A2
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 3 NC_000069.6 (19132144..19163090, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (19032144..19063065, complement)

    Chromosome 3 - NC_000069.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 30789 Neighboring gene predicted gene, 30341 Neighboring gene mitochondrial fission regulator 1 Neighboring gene phosphodiesterase 7A

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    metal ion transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    mitochondrion HDA PubMed 

    General protein information

    Preferred Names
    armadillo repeat-containing protein 1
    Names
    armadillo repeat containing protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001357689.1NP_001344618.1  armadillo repeat-containing protein 1 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC127283, BF464987
      Conserved Domains (1) summary
      smart00185
      Location:3267
      ARM; Armadillo/beta-catenin-like repeats
    2. NM_028840.3NP_083116.1  armadillo repeat-containing protein 1 isoform 1

      See identical proteins and their annotated locations for NP_083116.1

      Status: VALIDATED

      Source sequence(s)
      AC127283, AK034483, AK082783, BF464987, BY165551
      Consensus CDS
      CCDS17255.1
      UniProtKB/Swiss-Prot
      Q9D7A8
      Related
      ENSMUSP00000029125.8, ENSMUST00000029125.9
      Conserved Domains (2) summary
      cd00020
      Location:2191
      ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
      sd00043
      Location:3466
      ARM; armadillo repeat [structural motif]

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000069.6 Reference GRCm38.p4 C57BL/6J

      Range
      19132144..19163090 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006535556.1XP_006535619.1  armadillo repeat-containing protein 1 isoform X1

      Conserved Domains (1) summary
      smart00185
      Location:3267
      ARM; Armadillo/beta-catenin-like repeats
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