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    Klhl28 kelch-like 28 [ Mus musculus (house mouse) ]

    Gene ID: 66689, updated on 23-Jun-2021

    Summary

    Official Symbol
    Klhl28provided by MGI
    Official Full Name
    kelch-like 28provided by MGI
    Primary source
    MGI:MGI:1913939
    See related
    Ensembl:ENSMUSG00000020948
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Btbd5; 2810440N09Rik; 4122402F11Rik; 4931401E10Rik
    Expression
    Ubiquitous expression in whole brain E14.5 (RPKM 2.1), CNS E18 (RPKM 2.1) and 27 other tissues See more
    Orthologs
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    Try the new Transcript table

    Genomic context

    See Klhl28 in Genome Data Viewer
    Location:
    12; 12 C1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (64985603..65012365, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (64941486..64965581, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 12 NC_000078.5 (66043427..66066523, complement)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene ribosomal protein L7A, pseudogene 1 Neighboring gene predicted gene, 51965 Neighboring gene predicted gene 527 Neighboring gene TOG array regulator of axonemal microtubules 1 Neighboring gene predicted gene, 51966 Neighboring gene pre-mRNA processing factor 39 Neighboring gene predicted gene, 25970

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC47075

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    kelch-like protein 28
    Names
    BTB (POZ) domain containing 5
    BTB/POZ domain-containing protein 5

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025707.3NP_079983.1  kelch-like protein 28

      See identical proteins and their annotated locations for NP_079983.1

      Status: PROVISIONAL

      Source sequence(s)
      AC159632
      Consensus CDS
      CCDS25938.1
      UniProtKB/Swiss-Prot
      Q9CR40
      Related
      ENSMUSP00000152602.2, ENSMUST00000222508.2
      Conserved Domains (2) summary
      PHA03098
      Location:35553
      PHA03098; kelch-like protein; Provisional
      sd00038
      Location:423465
      Kelch; KELCH repeat [structural motif]

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      64985603..65012365 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006516156.5XP_006516219.1  kelch-like protein 28 isoform X1

      See identical proteins and their annotated locations for XP_006516219.1

      UniProtKB/Swiss-Prot
      Q9CR40
      Related
      ENSMUSP00000021331.8, ENSMUST00000021331.9
      Conserved Domains (2) summary
      PHA03098
      Location:35553
      PHA03098; kelch-like protein; Provisional
      sd00038
      Location:423465
      Kelch; KELCH repeat [structural motif]
    2. XM_006516157.5XP_006516220.1  kelch-like protein 28 isoform X2

      Conserved Domains (3) summary
      PHA03098
      Location:35522
      PHA03098; kelch-like protein; Provisional
      sd00038
      Location:376419
      Kelch; KELCH repeat [structural motif]
      cd18257
      Location:17134
      BTB_POZ_KLHL28_BTBD5; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Kelch-like protein 28 (KLHL28)
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