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    Nsa2 NSA2 ribosome biogenesis homolog [ Mus musculus (house mouse) ]

    Gene ID: 59050, updated on 30-Apr-2024


    Official Symbol
    Nsa2provided by MGI
    Official Full Name
    NSA2 ribosome biogenesis homologprovided by MGI
    Primary source
    See related
    Ensembl:ENSMUSG00000060739 AllianceGenome:MGI:1913883
    Gene type
    protein coding
    RefSeq status
    Mus musculus
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Yr29; LNR42; Nsa2p; Tinp1; 5730427N09Rik
    Predicted to be involved in maturation of 5.8S rRNA and maturation of LSU-rRNA. Predicted to act upstream of or within rRNA processing. Predicted to be located in nucleus. Predicted to be part of preribosome, large subunit precursor. Is expressed in several structures, including branchial arch; extraembryonic ectoderm; neural ectoderm; and trunk mesenchyme. Orthologous to human NSA2 (NSA2 ribosome biogenesis factor). [provided by Alliance of Genome Resources, Apr 2022]
    Broad expression in CNS E11.5 (RPKM 31.3), bladder adult (RPKM 26.9) and 24 other tissues See more
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    Genomic context

    See Nsa2 in Genome Data Viewer
    13 D1; 13 50.66 cM
    Exon count:
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (97265935..97274434, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (97129427..97137926, complement)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700029F12 gene Neighboring gene predicted gene, 41028 Neighboring gene STARR-seq mESC enhancer starr_35359 Neighboring gene family with sequence similarity 169, member A Neighboring gene STARR-seq mESC enhancer starr_35363 Neighboring gene proteolipid protein 2, retrotransposed Neighboring gene STARR-positive B cell enhancer ABC_E3094 Neighboring gene G elongation factor, mitochondrial 2 Neighboring gene hexosaminidase B Neighboring gene STARR-seq mESC enhancer starr_35367 Neighboring gene STARR-seq mESC enhancer starr_35370 Neighboring gene ectodermal-neural cortex 1

    Genomic regions, transcripts, and products


    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a



    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 


    Products Interactant Other Gene Complex Source Pubs Description

    General gene information


    Clone Names

    • MGC118054

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in maturation of 5.8S rRNA IBA
    Inferred from Biological aspect of Ancestor
    more info
    involved_in maturation of LSU-rRNA IBA
    Inferred from Biological aspect of Ancestor
    more info
    acts_upstream_of_or_within rRNA processing IEA
    Inferred from Electronic Annotation
    more info
    acts_upstream_of_or_within ribosome biogenesis IEA
    Inferred from Electronic Annotation
    more info
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    part_of preribosome, large subunit precursor IBA
    Inferred from Biological aspect of Ancestor
    more info
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info

    General protein information

    Preferred Names
    ribosome biogenesis protein NSA2 homolog
    L-name related protein
    L-name-related protein 42
    TGF-beta-inducible nuclear protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_021552.5NP_067527.3  ribosome biogenesis protein NSA2 homolog

      See identical proteins and their annotated locations for NP_067527.3

      Status: VALIDATED

      Source sequence(s)
      AC154620, AK078457, CJ132894
      Consensus CDS
      A0JNU8, Q8BHQ6, Q8BHT0, Q9CR47, Q9CRQ0, Q9CS34, Q9CYK0, Q9JKF9
      ENSMUSP00000073161.8, ENSMUST00000073456.9
      Conserved Domains (1) summary
      NSA2; pre-ribosomal protein NSA2 (Nop seven-associated 2)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J


    1. NC_000079.7 Reference GRCm39 C57BL/6J

      97265935..97274434 complement
      GenBank, FASTA, Sequence Viewer (Graphics)