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    Dnal4 dynein, axonemal, light chain 4 [ Mus musculus (house mouse) ]

    Gene ID: 54152, updated on 9-Nov-2022

    Summary

    Official Symbol
    Dnal4provided by MGI
    Official Full Name
    dynein, axonemal, light chain 4provided by MGI
    Primary source
    MGI:MGI:1859217
    See related
    Ensembl:ENSMUSG00000022420 AllianceGenome:MGI:1859217
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Dnalc4; D15Ertd424e
    Summary
    Predicted to enable dynein intermediate chain binding activity; dynein light intermediate chain binding activity; and identical protein binding activity. Predicted to be involved in microtubule-based process. Predicted to be located in cilium; cytoplasm; and microtubule. Predicted to be part of dynein complex. Is expressed in central nervous system; heart ventricle; and retina. Human ortholog(s) of this gene implicated in congenital mirror movement disorder. Orthologous to human DNAL4 (dynein axonemal light chain 4). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Ubiquitous expression in testis adult (RPKM 61.0), whole brain E14.5 (RPKM 24.4) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Dnal4 in Genome Data Viewer
    Location:
    15 E1; 15 37.85 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (79645650..79658681, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (79761449..79774467, complement)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene Sad1 and UNC84 domain containing 2 Neighboring gene predicted gene 16576 Neighboring gene uncharacterized LOC118568210 Neighboring gene predicted gene, 30977 Neighboring gene neuronal pentraxin receptor Neighboring gene neuronal pentraxin chromo domain

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 
    • Endonuclease-mediated (1) 

    Pathways from PubChem

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in microtubule-based process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cell projection IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cilium IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    part_of dynein complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in microtubule IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    dynein axonemal light chain 4; dynein light chain 4, axonemal
    Names
    dynein, axon, light chain 4
    outer arm dynein light chain 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001411918.1NP_001398847.1  dynein axonemal light chain 4 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC118227
      UniProtKB/Swiss-Prot
      Q99K65
      UniProtKB/TrEMBL
      A0A6P5QWW2, A0A8C6MP58
    2. NM_001411919.1NP_001398848.1  dynein axonemal light chain 4 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC118227
      UniProtKB/TrEMBL
      A0A2R8VI05
    3. NM_017470.3NP_059498.2  dynein axonemal light chain 4 isoform 1

      See identical proteins and their annotated locations for NP_059498.2

      Status: VALIDATED

      Source sequence(s)
      AC118227
      Consensus CDS
      CCDS27650.1
      UniProtKB/Swiss-Prot
      Q99K65, Q9DCM4
      UniProtKB/TrEMBL
      A0A6P5QWW2, A0A8C6MP58
      Related
      ENSMUSP00000023055.7, ENSMUST00000023055.8
      Conserved Domains (1) summary
      cd21453
      Location:21103
      DLC-like_DNAL4; dynein light chain (DLC)-like domain found in axonemal dynein light chain 4 (DNAL4) and similar proteins

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      79645650..79658681 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006521170.4XP_006521233.1  dynein light chain 4, axonemal isoform X1

      UniProtKB/Swiss-Prot
      Q9DCM4
      Related
      ENSMUSP00000154848.2, ENSMUST00000162713.9
      Conserved Domains (1) summary
      cd21453
      Location:21103
      DLC-like_DNAL4; dynein light chain (DLC)-like domain found in axonemal dynein light chain 4 (DNAL4) and similar proteins