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    cdca8 cell division cycle associated 8 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 444885, updated on 5-Mar-2024

    Summary

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    Official Symbol
    cdca8provided by Xenbase
    Official Full Name
    cell division cycle associated 8provided by Xenbase
    Primary source
    Xenbase:XB-GENE-946929
    See related
    Ensembl:ENSXETG00000002167
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    bor; dasrab; Dasra-B; borealin
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (84664066..84680899, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (58938239..58954644, complement)

    Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene ephrin type-A receptor 7-like Neighboring gene ephrin type-A receptor 7 Neighboring gene dynein axonemal light intermediate chain 1 Neighboring gene guanine nucleotide binding protein-like 2 (nucleolar) Neighboring gene R-spondin 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The chromosomal passenger complex is required for chromatin-induced microtubule stabilization and spindle assembly. Sampath SC, et al. Cell, 2004 Jul 23. PMID 15260989
    2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Process Evidence Code Pubs
    acts_upstream_of_or_within cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within cell division IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within chromosome segregation IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in mitotic sister chromatid segregation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in chromosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of chromosome passenger complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in chromosome, centromeric region IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in chromosome, centromeric region IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in spindle IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in spindle midzone IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    borealin
    Names
    cell division cycle-associated protein 8
    chromosomal passenger complex protein Dasra B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001002902.1 → NP_001002902.1  borealin

      See identical proteins and their annotated locations for NP_001002902.1

      Status: PROVISIONAL

      Source sequence(s)
      BC074572
      UniProtKB/Swiss-Prot
      Q6GLC7
      Conserved Domains (2) summary
      pfam10444
      Location:23 → 77
      Nbl1_Borealin_N; Nbl1 / Borealin N terminal
      pfam10512
      Location:164 → 277
      Borealin; Cell division cycle-associated protein 8

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      84664066..84680899 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018091156.1 → XP_017946645.1  borealin isoform X1

      UniProtKB/Swiss-Prot
      Q6GLC7
      Related
      ENSXETP00000004624.3, ENSXETT00000004624.4
      Conserved Domains (2) summary
      pfam10444
      Location:23 → 77
      Nbl1_Borealin_N; Nbl1 / Borealin N terminal
      pfam10512
      Location:164 → 277
      Borealin; Cell division cycle-associated protein 8

    2. XM_012956694.3 → XP_012812148.1  borealin isoform X1

      See identical proteins and their annotated locations for XP_012812148.1

      UniProtKB/Swiss-Prot
      Q6GLC7
      Conserved Domains (2) summary
      pfam10444
      Location:23 → 77
      Nbl1_Borealin_N; Nbl1 / Borealin N terminal
      pfam10512
      Location:164 → 277
      Borealin; Cell division cycle-associated protein 8
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6GLC7.1 GenPept UniProtKB/Swiss-Prot:Q6GLC7

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.