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    Atp6v0e ATPase, H+ transporting, lysosomal V0 subunit E [ Mus musculus (house mouse) ]

    Gene ID: 11974, updated on 31-Jan-2019

    Summary

    Official Symbol
    Atp6v0eprovided by MGI
    Official Full Name
    ATPase, H+ transporting, lysosomal V0 subunit Eprovided by MGI
    Primary source
    MGI:MGI:1328318
    See related
    Ensembl:ENSMUSG00000015575
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    M9.2; Atp6k; Atp6v0e1
    Expression
    Ubiquitous expression in genital fat pad adult (RPKM 163.1), kidney adult (RPKM 139.8) and 28 other tissues See more
    Orthologs

    Genomic context

    See Atp6v0e in Genome Data Viewer
    Location:
    17; 17 A3.3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 17 NC_000083.6 (26676396..26699647)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 17 NC_000083.5 (26813341..26836592)

    Chromosome 17 - NC_000083.6Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700049J03 gene Neighboring gene ribosomal protein S2 pseudogene Neighboring gene endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 Neighboring gene predicted gene, 41553 Neighboring gene CREB3 regulatory factor Neighboring gene BCL2/adenovirus E1B interacting protein 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    proton transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    proton-transporting ATPase activity, rotational mechanism ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    ATP hydrolysis coupled proton transport ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    ion transport IEA
    Inferred from Electronic Annotation
    more info
     
    proton transmembrane transport ISO
    Inferred from Sequence Orthology
    more info
     
    transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    proton-transporting V-type ATPase, V0 domain IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    V-type proton ATPase subunit e 1
    Names
    ATPase, H+ transporting lysosomal (vacuolar proton pump), 9.2 kDa
    ATPase, H+ transporting, V0 subunit e
    ATPase, H+ transporting, lysosomal 9kD V0 subunit E
    V-ATPase subunit e 1
    lysosomal 9kDa
    vacuolar proton pump subunit e 1
    NP_079548.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025272.2NP_079548.1  V-type proton ATPase subunit e 1

      See identical proteins and their annotated locations for NP_079548.1

      Status: VALIDATED

      Source sequence(s)
      AK017760, BY707658
      Consensus CDS
      CCDS28554.1
      UniProtKB/Swiss-Prot
      Q9CQD8
      Related
      ENSMUSP00000015719.8, ENSMUST00000015719.14
      Conserved Domains (1) summary
      pfam05493
      Location:967
      ATP_synt_H; ATP synthase subunit H

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000083.6 Reference GRCm38.p4 C57BL/6J

      Range
      26676396..26699647
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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