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    eif3ba eukaryotic translation initiation factor 3, subunit Ba [ Seriola dumerili (greater amberjack) ]

    Gene ID: 111216580, updated on 15-Mar-2024

    Summary

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    Gene symbol
    eif3ba
    Gene description
    eukaryotic translation initiation factor 3, subunit Ba
    See related
    Ensembl:ENSSDUG00000016761
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Seriola dumerili
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
    Also known as
    eif3b
    Orthologs
    human zebrafish all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174290.1 (2641776..2649232, complement)

    NW_019174290.1Genomic Context describing neighboring genes Neighboring gene endoplasmic reticulum to nucleus signaling 2 Neighboring gene carbohydrate sulfotransferase 12 Neighboring gene BRCA1-associated ATM activator 1 Neighboring gene GRB2-related adapter protein-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019174290 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation initiation factor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translational initiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of eukaryotic translation initiation factor 3 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    eukaryotic translation initiation factor 3 subunit B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sdu_1.0 Primary Assembly

    Genomic

    1. NW_019174290.1 Reference Sdu_1.0 Primary Assembly

      Range
      2641776..2649232 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022738130.1 → XP_022593851.1  eukaryotic translation initiation factor 3 subunit B

      UniProtKB/TrEMBL
      A0A3B4UXI3
      Related
      ENSSDUP00000023099.1, ENSSDUT00000023524.1
      Conserved Domains (3) summary
      cd12278
      Location:63 → 131
      RRM_eIF3B; RNA recognition motif in eukaryotic translation initiation factor 3 subunit B (eIF-3B) and similar proteins
      sd00039
      Location:195 → 239
      7WD40; WD40 repeat [structural motif]
      cl25541
      Location:175 → 672
      eIF2A; Eukaryotic translation initiation factor eIF2A
    Nucleotide Protein
    Heading Accession and Version

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