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    Pttg1ip pituitary tumor-transforming 1 interacting protein [ Mus musculus (house mouse) ]

    Gene ID: 108705, updated on 19-Jul-2018

    Summary

    Official Symbol
    Pttg1ipprovided by MGI
    Official Full Name
    pituitary tumor-transforming 1 interacting proteinprovided by MGI
    Primary source
    MGI:MGI:2652132
    See related
    Ensembl:ENSMUSG00000009291 Vega:OTTMUSG00000035073
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    PBF; C79540; AI314311; AU018448; 1810010L20Rik
    Expression
    Ubiquitous expression in bladder adult (RPKM 114.2), kidney adult (RPKM 87.1) and 28 other tissues See more
    Orthologs

    Genomic context

    See Pttg1ip in Genome Data Viewer
    Location:
    10; 10 C1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 10 NC_000076.6 (77581767..77598732)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (77044512..77061477)

    Chromosome 10 - NC_000076.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 36040 Neighboring gene integrin beta 2 Neighboring gene small ubiquitin-like modifier 3 Neighboring gene ubiquitin-conjugating enzyme E2G 2 Neighboring gene small nuclear ribonucleoprotein G pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Markers

    Homology

    Clone Names

    • MGC36923

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    p53 binding ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    pituitary tumor-transforming gene 1 protein-interacting protein
    Names
    PTTG-binding factor
    pituitary tumor-transforming gene protein-binding factor

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_145925.3NP_666037.1  pituitary tumor-transforming gene 1 protein-interacting protein precursor

      See identical proteins and their annotated locations for NP_666037.1

      Status: VALIDATED

      Source sequence(s)
      AK035696, AW049237, CJ149002
      Consensus CDS
      CCDS23957.1
      UniProtKB/Swiss-Prot
      Q8R143
      Related
      ENSMUSP00000009435.5, OTTMUSP00000048728, ENSMUST00000009435.11

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000076.6 Reference GRCm38.p4 C57BL/6J

      Range
      77581767..77598732
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011243262.2XP_011241564.1  pituitary tumor-transforming gene 1 protein-interacting protein isoform X1

      See identical proteins and their annotated locations for XP_011241564.1

      UniProtKB/TrEMBL
      F6TFF2
      Related
      ENSMUSP00000124313.2, ENSMUST00000162943.8
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