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    zc3h12b zinc finger CCCH-type containing 12B [ Neolamprologus brichardi ]

    Gene ID: 102800093, updated on 10-Mar-2024

    Summary

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    Gene symbol
    zc3h12b
    Gene description
    zinc finger CCCH-type containing 12B
    See related
    Ensembl:ENSNBRG00000014889
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Neolamprologus brichardi
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Lamprologini; Neolamprologus
    Orthologs
    human zebrafish all
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    Genomic context

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    See zc3h12b in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    101 current NeoBri1.0 (GCF_000239395.1) Unplaced Scaffold NW_006272065.1 (2590510..2604139)

    NW_006272065.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102798854 Neighboring gene GRB2 associated binding protein 3 Neighboring gene APC membrane recruitment protein 1 Neighboring gene moesin a Neighboring gene N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006272065 Unplaced Scaffold Reference NeoBri1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA endonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasmic ribonucleoprotein granule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable ribonuclease ZC3H12B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Neolamprologus brichardi Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NeoBri1.0 Primary Assembly

    Genomic

    1. NW_006272065.1 Reference NeoBri1.0 Primary Assembly

      Range
      2590510..2604139
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006799526.2 → XP_006799589.1  probable ribonuclease ZC3H12B

      See identical proteins and their annotated locations for XP_006799589.1

      UniProtKB/TrEMBL
      A0A3Q4H8T3
      Related
      ENSNBRP00000019325.1, ENSNBRT00000019837.1
      Conserved Domains (1) summary
      pfam11977
      Location:198 → 354
      RNase_Zc3h12a; Zc3h12a-like Ribonuclease NYN domain

    2. XM_006799527.1 → XP_006799590.1  probable ribonuclease ZC3H12B

      See identical proteins and their annotated locations for XP_006799590.1

      UniProtKB/TrEMBL
      A0A3Q4H8T3
      Conserved Domains (1) summary
      pfam11977
      Location:198 → 354
      RNase_Zc3h12a; Zc3h12a-like Ribonuclease NYN domain

    3. XM_006799528.2 → XP_006799591.1  probable ribonuclease ZC3H12B

      See identical proteins and their annotated locations for XP_006799591.1

      UniProtKB/TrEMBL
      A0A3Q4H8T3
      Conserved Domains (1) summary
      pfam11977
      Location:198 → 354
      RNase_Zc3h12a; Zc3h12a-like Ribonuclease NYN domain
    Nucleotide Protein
    Heading Accession and Version

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