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    TRMT6 tRNA methyltransferase 6 non-catalytic subunit [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

    Gene ID: 102452862, updated on 10-Mar-2024

    Summary

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    Gene symbol
    TRMT6
    Gene description
    tRNA methyltransferase 6 non-catalytic subunit
    See related
    Ensembl:ENSPSIG00000017048
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pelodiscus sinensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
    Orthologs
    human mouse all
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    Genomic context

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    See TRMT6 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005858987.1 (350503..381501, complement)

    NW_005858987.1Genomic Context describing neighboring genes Neighboring gene glycerophosphocholine phosphodiesterase 1 Neighboring gene shieldin complex subunit 1 Neighboring gene chromogranin B Neighboring gene minichromosome maintenance 8 homologous recombination repair factor Neighboring gene cardiolipin synthase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_005858987 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in tRNA methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of tRNA (m1A) methyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6
    Names
    tRNA methyltransferase 6 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference PelSin_1.0 Primary Assembly

    Genomic

    1. NW_005858987.1 Reference PelSin_1.0 Primary Assembly

      Range
      350503..381501 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006136001.3 → XP_006136063.1  tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 isoform X1

      UniProtKB/TrEMBL
      K7GFY1
      Related
      ENSPSIP00000019192.1, ENSPSIT00000019282.1
      Conserved Domains (2) summary
      pfam04189
      Location:11 → 280
      Gcd10p; Gcd10p family
      pfam11861
      Location:284 → 354
      DUF3381; Domain of unknown function (DUF3381)

    2. XM_014580027.2 → XP_014435513.1  tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 isoform X2

      Conserved Domains (1) summary
      pfam04189
      Location:12 → 174
      Gcd10p; Gcd10p family

    3. XM_025177971.1 → XP_025033756.1  tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 isoform X2

      Conserved Domains (1) summary
      pfam04189
      Location:12 → 174
      Gcd10p; Gcd10p family
    Nucleotide Protein
    Heading Accession and Version

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