These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001105251.4 → NP_001098721.2 zinc finger FYVE domain-containing protein 16 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3 and 5 encode the same protein (isoform a).
- Source sequence(s)
-
AC008771
- Consensus CDS
-
CCDS4050.1
- Related
- ENSP00000423663.1, ENST00000510158.5
-
NM_001284236.3 → NP_001271165.2 zinc finger FYVE domain-containing protein 16 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1, 2 ,3 and 5 encode the same protein (isoform a).
- Source sequence(s)
-
AC008771
- Consensus CDS
-
CCDS4050.1
- Related
- ENSP00000426848.1, ENST00000505560.5
- Conserved Domains (2) summary
-
- cd15729
Location:738 → 804
- FYVE_endofin; FYVE domain found in endofin and similar proteins
- pfam11979
Location:1167 → 1515
- DUF3480; Domain of unknown function (DUF3480)
-
NM_001284237.2 → NP_001271166.2 zinc finger FYVE domain-containing protein 16 isoform b
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks several exons in the 3' coding region and contains a 3' terminal exon that extends past a splice site that is used in variant 1 resulting in an early stop codon, and a different 3' UTR, compared to variant 1. The encoded protein (isoform b) has a distinct C-terminus and is shorter than isoform a.
- Source sequence(s)
-
AC008771
- Related
-
ENST00000510995.1
-
NM_001349434.2 → NP_001336363.2 zinc finger FYVE domain-containing protein 16 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3 and 5 encode the same protein (isoform a).
- Source sequence(s)
-
AC008771
- Consensus CDS
-
CCDS4050.1
-
NM_014733.6 → NP_055548.4 zinc finger FYVE domain-containing protein 16 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (a). Variants 1, 2, 3 and 5 encode the same protein (isoform a).
- Source sequence(s)
-
AC008771
- Consensus CDS
-
CCDS4050.1
- Related
- ENSP00000337159.5, ENST00000338008.9
RNA
-
NR_146172.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) contains three alternate internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC008771
-
NR_146173.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) contains two alternate internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC008771
-
NR_146174.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (8) contains two alternate internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC008771