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KIAA0100 KIAA0100 [ Homo sapiens (human) ]

Gene ID: 9703, updated on 1-Jun-2020

Summary

Official Symbol
KIAA0100provided by HGNC
Official Full Name
KIAA0100provided by HGNC
Primary source
HGNC:HGNC:28960
See related
Ensembl:ENSG00000007202 MIM:610664
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
BCOX; BCOX1; CT101; FMP27
Summary
This gene was initially characterized in human as having high expression levels in breast carcinomas and breast cancer cell lines. This gene also has increased expression in prostrate cancer cells relative to normal prostrate tissues. Expression of this gene is negatively regulated by direct binding of the microRNA miR-195 to its 3' UTR. miR-195 has been shown to modulate the invasiveness of prostrate cancer cells and xenograft metastases by downgrading expression of this gene. In mouse, the protein encoded by this gene was identified as an antigen on acute monocytic leukemia cells. In human, alternative splicing results in multiple transcript variants encoding distinct isoforms; some of these isoforms are predicted to contain an RNA pol II promoter FMP27 protein domain and a Golgi-body-localization APT1 domain. [provided by RefSeq, Apr 2017]
Expression
Ubiquitous expression in kidney (RPKM 27.5), thyroid (RPKM 25.9) and 25 other tissues See more
Orthologs

Genomic context

See KIAA0100 in Genome Data Viewer
Location:
17q11.2
Exon count:
40
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (28614440..28645159, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (26941458..26972177, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene sperm associated antigen 5 Neighboring gene SPAG5 antisense RNA 1 Neighboring gene ribosomal protein S6 kinase related Neighboring gene stromal cell derived factor 2 Neighboring gene ribosomal protein S12 pseudogene 28 Neighboring gene SPT6 homolog, histone chaperone and transcription elongation factor Neighboring gene Sharpr-MPRA regulatory region 10516

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC111488, MGC134981, DKFZp686M0843

Gene Ontology Provided by GOA

Component Evidence Code Pubs
extracellular region IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
protein KIAA0100
Names
U937-associated antigen
antigen MLAA-22
breast cancer overexpressed gene 1
breast cancer-overexpressed gene 1 protein
cancer/testis antigen 101

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_053109.1 RefSeqGene

    Range
    5297..36009
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001321560.2NP_001308489.1  protein KIAA0100 isoform 2 precursor

    Status: REVIEWED

    Source sequence(s)
    AC005726
    Conserved Domains (3) summary
    pfam10344
    Location:26674
    Fmp27; Mitochondrial protein from FMP27
    pfam10347
    Location:10281160
    Fmp27_GFWDK; RNA pol II promoter Fmp27 protein domain
    pfam10351
    Location:17022175
    Apt1; Golgi-body localization protein domain
  2. NM_001321561.2NP_001308490.1  protein KIAA0100 isoform 3

    Status: REVIEWED

    Source sequence(s)
    AW161205, BC050440
    Related
    ENST00000580882.5
    Conserved Domains (1) summary
    pfam10344
    Location:26410
    Fmp27; Mitochondrial protein from FMP27
  3. NM_001363826.1NP_001350755.1  protein KIAA0100 isoform 4

    Status: REVIEWED

    Source sequence(s)
    AC005726
    Consensus CDS
    CCDS86585.1
    Related
    ENSP00000446443.1, ENST00000544884.5
    Conserved Domains (3) summary
    pfam10344
    Location:1531
    Fmp27; Mitochondrial protein from FMP27
    pfam10347
    Location:8851017
    Fmp27_GFWDK; RNA pol II promoter Fmp27 protein domain
    pfam10351
    Location:15602033
    Apt1; Golgi-body localization protein domain
  4. NM_001363827.1NP_001350756.1  protein KIAA0100 isoform 5

    Status: REVIEWED

    Source sequence(s)
    AC005726
  5. NM_001363828.1NP_001350757.1  protein KIAA0100 isoform 6

    Status: REVIEWED

    Source sequence(s)
    AC005726
    Conserved Domains (2) summary
    pfam10347
    Location:353485
    Fmp27_GFWDK; RNA pol II promoter Fmp27 protein domain
    pfam10351
    Location:10281501
    Apt1; Golgi-body localization protein domain
  6. NM_001363829.1NP_001350758.1  protein KIAA0100 isoform 7

    Status: REVIEWED

    Source sequence(s)
    AC005726
  7. NM_014680.5NP_055495.2  protein KIAA0100 isoform 1 precursor

    See identical proteins and their annotated locations for NP_055495.2

    Status: REVIEWED

    Source sequence(s)
    AW161205, BM999622, D43947, DB152098
    Consensus CDS
    CCDS32595.1
    UniProtKB/Swiss-Prot
    Q14667
    Related
    ENSP00000436773.2, ENST00000528896.7
    Conserved Domains (3) summary
    pfam10344
    Location:26674
    Fmp27; Mitochondrial protein from FMP27
    pfam10347
    Location:10281160
    Fmp27_GFWDK; RNA pol II promoter Fmp27 protein domain
    pfam10351
    Location:17032176
    Apt1; Golgi-body localization protein domain

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    28614440..28645159 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_002958095.1 RNA Sequence

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