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Bltp2 bridge-like lipid transfer protein family member 2 [ Mus musculus (house mouse) ]

Gene ID: 72503, updated on 5-Jan-2023

Summary

Official Symbol
Bltp2provided by MGI
Official Full Name
bridge-like lipid transfer protein family member 2provided by MGI
Primary source
MGI:MGI:1919753
See related
Ensembl:ENSMUSG00000010277 AllianceGenome:MGI:1919753
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
E1; mKIAA0100; D11Bhm178e; D11Bhm179e; 2610507B11Rik
Summary
Predicted to be located in extracellular region. Is expressed in several structures, including adrenal medulla; glans of male genital tubercle; gut; nasal cavity epithelium; and nervous system. Orthologous to human KIAA0100 (KIAA0100). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in testis adult (RPKM 45.9), kidney adult (RPKM 37.8) and 28 other tissues See more
Orthologs
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Genomic context

See Bltp2 in Genome Data Viewer
Location:
11 B5; 11 46.74 cM
Exon count:
39
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (78152476..78181451)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (78261650..78290625)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene SPT6, histone chaperone and transcription elongation factor Neighboring gene small nuclear ribonucleoprotein N pseudogene Neighboring gene stromal cell derived factor 2 Neighboring gene predicted gene 3948 Neighboring gene ribosomal protein S6 kinase related Neighboring gene sperm associated antigen 5

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • KIAA0100

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
bridge-like lipid transfer protein family member 2; protein KIAA0100

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001002004.2NP_001002004.2  bridge-like lipid transfer protein family member 2 precursor

    See identical proteins and their annotated locations for NP_001002004.2

    Status: VALIDATED

    Source sequence(s)
    AK029280, AK149719, AK150829, BC075633
    Consensus CDS
    CCDS25097.1
    UniProtKB/Swiss-Prot
    Q5SYL3, Q9CSS8
    Related
    ENSMUSP00000010421.7, ENSMUST00000010421.7
    Conserved Domains (3) summary
    pfam10344
    Location:26674
    Fmp27; Mitochondrial protein from FMP27
    pfam10347
    Location:10281160
    Fmp27_GFWDK; RNA pol II promoter Fmp27 protein domain
    pfam10351
    Location:17032176
    Apt1; Golgi-body localization protein domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    78152476..78181451
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006534313.3XP_006534376.1  protein KIAA0100 isoform X2

    Conserved Domains (2) summary
    pfam10344
    Location:26674
    Fmp27; Mitochondrial protein from FMP27
    pfam10347
    Location:10281160
    Fmp27_GFWDK; RNA pol II promoter Fmp27 protein domain
  2. XM_006534312.3XP_006534375.1  protein KIAA0100 isoform X1

    Conserved Domains (3) summary
    pfam10344
    Location:1531
    Fmp27; Mitochondrial protein from FMP27
    pfam10347
    Location:8851017
    Fmp27_GFWDK; RNA pol II promoter Fmp27 protein domain
    pfam10351
    Location:15602033
    Apt1; Golgi-body localization protein domain
  3. XM_030246365.2XP_030102225.1  protein KIAA0100 isoform X1

    Conserved Domains (3) summary
    pfam10344
    Location:1531
    Fmp27; Mitochondrial protein from FMP27
    pfam10347
    Location:8851017
    Fmp27_GFWDK; RNA pol II promoter Fmp27 protein domain
    pfam10351
    Location:15602033
    Apt1; Golgi-body localization protein domain

RNA

  1. XR_001780057.3 RNA Sequence

  2. XR_001780058.2 RNA Sequence