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ganB endo-beta-1,4-galactanase [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937086, updated on 6-Oct-2023

Summary

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Gene symbol
ganB
Gene description
endo-beta-1,4-galactanase
Locus tag
BSU_34120
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU34120
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Genomic context

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Sequence:
NC_000964.3 (3501651..3502940, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene regulator of RsbP phosphatase Neighboring gene phosphoserine protein-phosphatase Neighboring gene short chain beta-1,4-galacto-oligosaccharides beta-galactosidase (beta-galacto-pyranoside hydrolase) Neighboring gene galacto-oligosaccharides (galactan) oligomer permease

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
endo-beta-1,4-galactanase
NP_391292.2
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 11682178, 17056685, 27501980; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3501651..3502940 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391292.2 endo-beta-1,4-galactanase [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391292.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D4G1N8
    Conserved Domains (1) summary
    COG3867
    Location:6 → 429
    GanB; Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O07013.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases