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A094L beta-1-3-glucanase [ Paramecium bursaria Chlorella virus 1 ]

Gene ID: 917996, updated on 8-Sep-2020

Summary

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Gene symbol
A094L
Gene description
beta-1-3-glucanase
Locus tag
PBCV1_A094L
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Paramecium bursaria Chlorella virus 1 (acronym: PBCV-1, nat-host: Chlorella variabilis NC64A)
Lineage
Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Megaviricetes; Algavirales; Phycodnaviridae; Chlorovirus
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Genomic context

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Sequence:
NC_000852.5 (49662..50756, complement)

NC_000852.5Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene Hyaluronan synthase Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000852.5

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Microarray analysis of Paramecium bursaria chlorella virus 1 transcription. Yanai-Balser GM, et al. J Virol, 2010 Jan. PMID 19828609, Free PMC Article
  2. Characterization of a beta-1,3-glucanase encoded by chlorella virus PBCV-1. Sun L, et al. Virology, 2000 Oct 10. PMID 11021991
  3. Chlorella virus PBCV-1 encodes a functional homospermidine synthase. Kaiser A, et al. Virology, 1999 Oct 10. PMID 10544099
  4. Analysis of 74 kb of DNA located at the right end of the 330-kb chlorella virus PBCV-1 genome. Li Y, et al. Virology, 1997 Oct 27. PMID 9356347
  5. Analysis of 76 kb of the chlorella virus PBCV-1 330-kb genome: map positions 182 to 258. Kutish GF, et al. Virology, 1996 Sep 15. PMID 8806566

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
beta-1-3-glucanase
NP_048442.1
  • beta-1-3-glucanase; expression pattern: Early; COG best hit: COG2273 [Beta-glucanase/Beta-glucan synthetase] [4e-06]; Pfam hit: PF00722.14 [Glycosyl hydrolases family 16] [7.5e-13]; Refseq best hit: YP_001425751 [hypothetical protein FR483_N119L (Paramecium bursaria Chlorella virus FR483)] [1e-110]

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000852.5 Reference assembly

    Range
    49662..50756 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_048442.1 beta-1-3-glucanase [Paramecium bursaria Chlorella virus 1]

    See identical proteins and their annotated locations for NP_048442.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q84415
    Conserved Domains (1) summary
    cd08023
    Location:105 → 359
    GH16_laminarinase_like; Laminarinase, member of the glycosyl hydrolase family 16
Nucleotide Protein
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