NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001301861.2 → NP_001288790.1 brother of CDO isoform 1 precursor
See identical proteins and their annotated locations for NP_001288790.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AA716090, AC026329, AK074556, AY027658, AY358328, BC075829, DA247804, DB349011
- Consensus CDS
-
CCDS77788.1
- UniProtKB/Swiss-Prot
-
Q9BWV1
- Related
- ENSP00000273395.4, ENST00000273395.8
- Conserved Domains (6) summary
-
- cd00063
Location:607 → 698
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:486 → 560
- fn3; Fibronectin type III domain
- pfam13927
Location:36 → 109
- Ig_3; Immunoglobulin domain
- pfam16625
Location:409 → 473
- ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
- cd00096
Location:248 → 252
- Ig; Ig strand B [structural motif]
- cl11960
Location:239 → 306
- Ig; Immunoglobulin domain
-
NM_001301867.2 → NP_001288796.1 brother of CDO isoform 3 precursor
See identical proteins and their annotated locations for NP_001288796.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks several exons and its 3' terminal exon extends past a splice site that is used in variant 1. This results in a novel 3' coding region and 3' UTR, compared to variant 1. It encodes isoform 3 which is shorter and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC026329, AK056359, BC034614, BC075829, DA721979
- Consensus CDS
-
CCDS77789.1
- UniProtKB/TrEMBL
-
Q96DN7
- Related
- ENSP00000420154.1, ENST00000485230.5
- Conserved Domains (2) summary
-
- pfam13927
Location:36 → 109
- Ig_3; Immunoglobulin domain
- cd00096
Location:53 → 59
- Ig; Ig strand B [structural motif]
-
NM_001378073.1 → NP_001365002.1 brother of CDO isoform 1 precursor
Status: VALIDATED
- Source sequence(s)
-
AC026329
- Consensus CDS
-
CCDS77788.1
- Conserved Domains (6) summary
-
- cd00063
Location:607 → 698
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:486 → 560
- fn3; Fibronectin type III domain
- pfam13927
Location:36 → 109
- Ig_3; Immunoglobulin domain
- pfam16625
Location:409 → 473
- ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
- cd00096
Location:248 → 252
- Ig; Ig strand B [structural motif]
- cl11960
Location:239 → 306
- Ig; Immunoglobulin domain
-
NM_001378074.1 → NP_001365003.1 brother of CDO isoform 1 precursor
Status: VALIDATED
- Source sequence(s)
-
AC026329
- Consensus CDS
-
CCDS77788.1
- Related
- ENSP00000507783.1, ENST00000682979.1
- Conserved Domains (6) summary
-
- cd00063
Location:607 → 698
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:486 → 560
- fn3; Fibronectin type III domain
- pfam13927
Location:36 → 109
- Ig_3; Immunoglobulin domain
- pfam16625
Location:409 → 473
- ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
- cd00096
Location:248 → 252
- Ig; Ig strand B [structural motif]
- cl11960
Location:239 → 306
- Ig; Immunoglobulin domain
-
NM_001378075.1 → NP_001365004.1 brother of CDO isoform 2 precursor
Status: VALIDATED
- Source sequence(s)
-
AC026329
- Consensus CDS
-
CCDS2971.1
- UniProtKB/Swiss-Prot
-
Q8NF26
- Conserved Domains (6) summary
-
- cd00063
Location:606 → 697
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:486 → 559
- fn3; Fibronectin type III domain
- pfam13927
Location:36 → 109
- Ig_3; Immunoglobulin domain
- pfam16625
Location:409 → 473
- ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
- cd00096
Location:248 → 252
- Ig; Ig strand B [structural motif]
- cl11960
Location:239 → 306
- Ig; Immunoglobulin domain
-
NM_001387919.1 → NP_001374848.1 brother of CDO isoform 1 precursor
Status: VALIDATED
- Source sequence(s)
-
AC026329
- Consensus CDS
-
CCDS77788.1
- Conserved Domains (6) summary
-
- cd00063
Location:607 → 698
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:486 → 560
- fn3; Fibronectin type III domain
- pfam13927
Location:36 → 109
- Ig_3; Immunoglobulin domain
- pfam16625
Location:409 → 473
- ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
- cd00096
Location:248 → 252
- Ig; Ig strand B [structural motif]
- cl11960
Location:239 → 306
- Ig; Immunoglobulin domain
-
NM_001387920.1 → NP_001374849.1 brother of CDO isoform 2 precursor
Status: VALIDATED
- Source sequence(s)
-
AC026329
- Consensus CDS
-
CCDS2971.1
- UniProtKB/Swiss-Prot
-
Q8NF26
- Conserved Domains (6) summary
-
- cd00063
Location:606 → 697
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:486 → 559
- fn3; Fibronectin type III domain
- pfam13927
Location:36 → 109
- Ig_3; Immunoglobulin domain
- pfam16625
Location:409 → 473
- ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
- cd00096
Location:248 → 252
- Ig; Ig strand B [structural motif]
- cl11960
Location:239 → 306
- Ig; Immunoglobulin domain
-
NM_001387921.1 → NP_001374850.1 brother of CDO isoform 2 precursor
Status: VALIDATED
- Source sequence(s)
-
AC026329
- Consensus CDS
-
CCDS2971.1
- UniProtKB/Swiss-Prot
-
Q8NF26
- Conserved Domains (6) summary
-
- cd00063
Location:606 → 697
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:486 → 559
- fn3; Fibronectin type III domain
- pfam13927
Location:36 → 109
- Ig_3; Immunoglobulin domain
- pfam16625
Location:409 → 473
- ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
- cd00096
Location:248 → 252
- Ig; Ig strand B [structural motif]
- cl11960
Location:239 → 306
- Ig; Immunoglobulin domain
-
NM_001387922.1 → NP_001374851.1 brother of CDO isoform 3 precursor
Status: VALIDATED
- Source sequence(s)
-
AC026329
- Consensus CDS
-
CCDS77789.1
- UniProtKB/TrEMBL
-
Q96DN7
- Conserved Domains (2) summary
-
- pfam13927
Location:36 → 109
- Ig_3; Immunoglobulin domain
- cd00096
Location:53 → 59
- Ig; Ig strand B [structural motif]
-
NM_001387923.1 → NP_001374852.1 brother of CDO isoform 3 precursor
Status: VALIDATED
- Source sequence(s)
-
AC026329
- Consensus CDS
-
CCDS77789.1
- UniProtKB/TrEMBL
-
Q96DN7
- Conserved Domains (2) summary
-
- pfam13927
Location:36 → 109
- Ig_3; Immunoglobulin domain
- cd00096
Location:53 → 59
- Ig; Ig strand B [structural motif]
-
NM_001387924.1 → NP_001374853.1 brother of CDO isoform 4 precursor
Status: VALIDATED
- Source sequence(s)
-
AC026329
- Conserved Domains (6) summary
-
- cd00063
Location:516 → 607
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:395 → 469
- fn3; Fibronectin type III domain
- pfam13927
Location:36 → 109
- Ig_3; Immunoglobulin domain
- pfam16625
Location:321 → 382
- ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
- cd00096
Location:248 → 252
- Ig; Ig strand B [structural motif]
- cl11960
Location:239 → 306
- Ig; Immunoglobulin domain
-
NM_001387925.1 → NP_001374854.1 brother of CDO isoform 5 precursor
Status: VALIDATED
- Source sequence(s)
-
AC026329
- Conserved Domains (6) summary
-
- cd00063
Location:606 → 697
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:486 → 559
- fn3; Fibronectin type III domain
- pfam13927
Location:36 → 109
- Ig_3; Immunoglobulin domain
- pfam16625
Location:409 → 473
- ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
- cd00096
Location:248 → 252
- Ig; Ig strand B [structural motif]
- cl11960
Location:239 → 306
- Ig; Immunoglobulin domain
-
NM_001387926.1 → NP_001374855.1 brother of CDO isoform 6 precursor
Status: VALIDATED
- Source sequence(s)
-
AC026329
- Conserved Domains (6) summary
-
- cd00063
Location:607 → 698
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:486 → 560
- fn3; Fibronectin type III domain
- pfam13927
Location:36 → 109
- Ig_3; Immunoglobulin domain
- pfam16625
Location:409 → 473
- ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
- cd00096
Location:248 → 252
- Ig; Ig strand B [structural motif]
- cl11960
Location:239 → 306
- Ig; Immunoglobulin domain
-
NM_001387927.1 → NP_001374856.1 brother of CDO isoform 7 precursor
Status: VALIDATED
- Source sequence(s)
-
AC026329
- Conserved Domains (6) summary
-
- cd00063
Location:606 → 697
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:486 → 559
- fn3; Fibronectin type III domain
- pfam13927
Location:36 → 109
- Ig_3; Immunoglobulin domain
- pfam16625
Location:409 → 473
- ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
- cd00096
Location:248 → 252
- Ig; Ig strand B [structural motif]
- cl11960
Location:239 → 306
- Ig; Immunoglobulin domain
-
NM_001387928.1 → NP_001374857.1 brother of CDO isoform 7 precursor
Status: VALIDATED
- Source sequence(s)
-
AC026329
- Conserved Domains (6) summary
-
- cd00063
Location:606 → 697
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:486 → 559
- fn3; Fibronectin type III domain
- pfam13927
Location:36 → 109
- Ig_3; Immunoglobulin domain
- pfam16625
Location:409 → 473
- ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
- cd00096
Location:248 → 252
- Ig; Ig strand B [structural motif]
- cl11960
Location:239 → 306
- Ig; Immunoglobulin domain
-
NM_001387929.1 → NP_001374858.1 brother of CDO isoform 8 precursor
Status: VALIDATED
- Source sequence(s)
-
AC026329
- Conserved Domains (4) summary
-
- pfam13927
Location:322 → 395
- Ig_3; Immunoglobulin domain
- pfam16625
Location:409 → 473
- ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
- cd00096
Location:248 → 252
- Ig; Ig strand B [structural motif]
- cl11960
Location:239 → 306
- Ig; Immunoglobulin domain
-
NM_001387930.1 → NP_001374859.1 brother of CDO isoform 8 precursor
Status: VALIDATED
- Source sequence(s)
-
AC026329
- Conserved Domains (4) summary
-
- pfam13927
Location:322 → 395
- Ig_3; Immunoglobulin domain
- pfam16625
Location:409 → 473
- ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
- cd00096
Location:248 → 252
- Ig; Ig strand B [structural motif]
- cl11960
Location:239 → 306
- Ig; Immunoglobulin domain
-
NM_001387932.1 → NP_001374861.1 brother of CDO isoform 9 precursor
Status: VALIDATED
- Source sequence(s)
-
AC026329
- Conserved Domains (3) summary
-
- pfam13927
Location:36 → 109
- Ig_3; Immunoglobulin domain
- cd00096
Location:53 → 59
- Ig; Ig strand B [structural motif]
- cl11960
Location:129 → 204
- Ig; Immunoglobulin domain
-
NM_033254.4 → NP_150279.1 brother of CDO isoform 2 precursor
See identical proteins and their annotated locations for NP_150279.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, and uses an alternate in-frame splice site in the 5' coding region, compared to variant 1. It encodes isoform 2 which is shorter than isoform 1.
- Source sequence(s)
-
AA716090, AK074556, AY027658, AY358328, BC075829, DA721979, DB349011
- Consensus CDS
-
CCDS2971.1
- UniProtKB/Swiss-Prot
- Q8NF26, Q9BWV1
- Related
- ENSP00000418663.1, ENST00000495514.5
- Conserved Domains (6) summary
-
- cd00063
Location:606 → 697
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:486 → 559
- fn3; Fibronectin type III domain
- pfam13927
Location:36 → 109
- Ig_3; Immunoglobulin domain
- pfam16625
Location:409 → 473
- ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
- cd00096
Location:248 → 252
- Ig; Ig strand B [structural motif]
- cl11960
Location:239 → 306
- Ig; Immunoglobulin domain
RNA
-
NR_170866.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC026329