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KIAA2013 KIAA2013 [ Homo sapiens (human) ]

Gene ID: 90231, updated on 4-Jan-2020

Summary

Official Symbol
KIAA2013provided by HGNC
Official Full Name
KIAA2013provided by HGNC
Primary source
HGNC:HGNC:28513
See related
Ensembl:ENSG00000116685
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in duodenum (RPKM 28.0), small intestine (RPKM 27.3) and 25 other tissues See more
Orthologs

Genomic context

See KIAA2013 in Genome Data Viewer
Location:
1p36.22
Exon count:
3
Annotation release Status Assembly Chr Location
109.20191205 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (11919591..11926427, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (11979645..11986485, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene RNA, U5E small nuclear 1 Neighboring gene RNA, U5E small nuclear 4, pseudogene Neighboring gene Sharpr-MPRA regulatory region 3946 Neighboring gene Sharpr-MPRA regulatory region 8260 Neighboring gene procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 Neighboring gene mitofusin 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

HIV-1 interactions

Protein interactions

Protein Gene Interaction Pubs
Envelope transmembrane glycoprotein gp41 env HIV-1 gp41 is identified to have a physical interaction with KIAA2013 in human HEK293 and/or Jurkat cell lines by using affinity tagging and purification mass spectrometry analyses PubMed

Go to the HIV-1, Human Interaction Database

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC33867

Gene Ontology Provided by GOA

Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane HDA PubMed 

General protein information

Preferred Names
uncharacterized protein KIAA2013
Names
RP5-1077B9.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_138346.3NP_612355.1  uncharacterized protein KIAA2013 precursor

    See identical proteins and their annotated locations for NP_612355.1

    Status: VALIDATED

    Source sequence(s)
    AB095933, BC035033, CN260339
    Consensus CDS
    CCDS141.1
    UniProtKB/Swiss-Prot
    Q8IYS2
    Related
    ENSP00000365756.3, ENST00000376572.8
    Conserved Domains (1) summary
    pfam10222
    Location:6629
    DUF2152; Uncharacterized conserved protein (DUF2152)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20191205

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    11919591..11926427 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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