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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_011937.1 RefSeqGene
- Range
-
5280..13504
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001282474.2 → NP_001269403.1 AP-1 complex subunit gamma-like 2 isoform 2
See identical proteins and their annotated locations for NP_001269403.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses an alternate 5' exon structure and thus differs in the 5' UTR and 5' coding region compared to variant 1. These differences cause translation initiation at a downstream AUG and result in an isoform (2) with a shorter N-terminus, compared to isoform 1.
- Source sequence(s)
-
AI497879, BG701521, BX161425
- UniProtKB/TrEMBL
-
Q86U03
- Related
-
ENST00000460049.6
- Conserved Domains (2) summary
-
- smart00809
Location:291 → 399
- Alpha_adaptinC2; Adaptin C-terminal domain
- pfam01602
Location:1 → 194
- Adaptin_N; Adaptin N terminal region
-
NM_001282475.2 → NP_001269404.1 AP-1 complex subunit gamma-like 2 isoform 3
See identical proteins and their annotated locations for NP_001269404.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and has multiple differences in the coding region but maintains the reading frame, compared to variant 1. This variant encodes isoform 3, which is shorter than isoform 1.
- Source sequence(s)
-
AL135999, BC051833, BI918958, H41406
- UniProtKB/TrEMBL
-
Q86V28
- Related
-
ENST00000535852.6
- Conserved Domains (2) summary
-
- smart00809
Location:600 → 708
- Alpha_adaptinC2; Adaptin C-terminal domain
- pfam01602
Location:1 → 503
- Adaptin_N; Adaptin N terminal region
-
NM_001354673.2 → NP_001341602.1 AP-1 complex subunit gamma-like 2 isoform 4
Status: REVIEWED
- Source sequence(s)
-
AK304682, AL135999
- Conserved Domains (2) summary
-
- pfam01602
Location:1 → 446
- Adaptin_N; Adaptin N terminal region
- pfam02883
Location:543 → 651
- Alpha_adaptinC2; Adaptin C-terminal domain
-
NM_001354674.2 → NP_001341603.1 AP-1 complex subunit gamma-like 2 isoform 2
Status: REVIEWED
- Source sequence(s)
-
AK304682, AL135999
- UniProtKB/TrEMBL
-
Q86U03
- Conserved Domains (2) summary
-
- smart00809
Location:291 → 399
- Alpha_adaptinC2; Adaptin C-terminal domain
- pfam01602
Location:1 → 194
- Adaptin_N; Adaptin N terminal region
-
NM_001354675.2 → NP_001341604.1 AP-1 complex subunit gamma-like 2 isoform 2
Status: REVIEWED
- Source sequence(s)
-
AK304682, AL135999
- UniProtKB/TrEMBL
-
Q86U03
- Related
-
ENST00000465445.6
- Conserved Domains (2) summary
-
- smart00809
Location:291 → 399
- Alpha_adaptinC2; Adaptin C-terminal domain
- pfam01602
Location:1 → 194
- Adaptin_N; Adaptin N terminal region
-
NM_001354677.2 → NP_001341606.1 AP-1 complex subunit gamma-like 2 isoform 2
Status: REVIEWED
- Source sequence(s)
-
AK304682, AL135999
- UniProtKB/TrEMBL
-
Q86U03
- Conserved Domains (2) summary
-
- smart00809
Location:291 → 399
- Alpha_adaptinC2; Adaptin C-terminal domain
- pfam01602
Location:1 → 194
- Adaptin_N; Adaptin N terminal region
-
NM_001354681.2 → NP_001341610.1 AP-1 complex subunit gamma-like 2 isoform 2
Status: REVIEWED
- Source sequence(s)
-
AK304682, AL135999
- UniProtKB/TrEMBL
-
Q86U03
- Conserved Domains (2) summary
-
- smart00809
Location:291 → 399
- Alpha_adaptinC2; Adaptin C-terminal domain
- pfam01602
Location:1 → 194
- Adaptin_N; Adaptin N terminal region
-
NM_003917.5 → NP_003908.1 AP-1 complex subunit gamma-like 2 isoform 1
See identical proteins and their annotated locations for NP_003908.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AB015318, BG701521, BQ073124
- Consensus CDS
-
CCDS9602.1
- UniProtKB/Swiss-Prot
- O75504, O75843
- Related
- ENSP00000380309.3, ENST00000397120.8
- Conserved Domains (2) summary
-
- smart00809
Location:672 → 780
- Alpha_adaptinC2; Adaptin C-terminal domain
- pfam01602
Location:24 → 575
- Adaptin_N; Adaptin N terminal region
RNA
-
NR_148937.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (9) is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK304682, AL135999
-
NR_148938.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (11) is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK304682, AL135999
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_080545.1: Suppressed sequence
- Description
- NM_080545.1: This RefSeq was temporarily suppressed because insufficient data to support this transcript currently exist.