U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

hypothetical protein [ Dictyostelium discoideum AX4 ]

Gene ID: 8624316, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
hypothetical protein
Primary source
dictyBase:DDB_G0283901
Locus tag
DDB_G0283901
See related
AmoebaDB:DDB_G0283901; VEuPathDB:DDB_G0283901
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Dictyostelium discoideum AX4 (strain: AX4)
Lineage
Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales; Dictyosteliaceae; Dictyostelium
Old locus tag
DDBDRAFT_0218547; DDB_0218547
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_007090.3 (1254496..1256100, complement)

Chromosome 4 - NC_007090.3Genomic Context describing neighboring genes Neighboring gene Cdc15/Fes/CIP4 domain-containing protein Neighboring gene hypothetical protein Neighboring gene filamin/ABP280 repeat-containing protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_007090.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by dictyBase

Process Evidence Code Pubs
involved_in RNA splicing IEA
Inferred from Electronic Annotation
more info
  
involved_in mRNA processing IEA
Inferred from Electronic Annotation
more info
  
involved_in mRNA splicing, via spliceosome IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of U2-type spliceosomal complex IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007090.3 Reference assembly

    Range
    1254496..1256100 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_633827.1 → XP_638919.1  hypothetical protein DDB_G0283901 [Dictyostelium discoideum AX4]

    See identical proteins and their annotated locations for XP_638919.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q54QF2
    Conserved Domains (2) summary
    pfam10197
    Location:10 → 46
    Cir_N; N-terminal domain of CBF1 interacting co-repressor CIR
    pfam12542
    Location:67 → 154
    CWC25; Pre-mRNA splicing factor
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials