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SUS6 sucrose synthase 6 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843672, updated on 18-Sep-2024

Summary

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Official Symbol
SUS6
Official Full Name
sucrose synthase 6
Primary source
TAIR:AT1G73370
Locus tag
AT1G73370
See related
Araport:AT1G73370
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS THALIANA SUCROSE SYNTHASE 6; ATSUS6; sucrose synthase 6; T9L24.42; T9L24_42
Summary
Encodes a protein with sucrose synthase activity (SUS6).
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Genomic context

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See SUS6 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Sequence:
Chromosome: 1; NC_003070.9 (27584364..27588978, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene homeodomain GLABROUS 11 Neighboring gene uncharacterized protein Neighboring gene Endosomal targeting BRO1-like domain-containing protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Normal growth of Arabidopsis requires cytosolic invertase but not sucrose synthase. Barratt DH, et al. Proc Natl Acad Sci U S A, 2009 Aug 4. PMID 19470642, Free PMC Article
  2. Analysis of the sucrose synthase gene family in Arabidopsis. Bieniawska Z, et al. Plant J, 2007 Mar. PMID 17257168
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

NM_001198461.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables sucrose synthase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables sucrose synthase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within callose deposition in phloem sieve plate IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in sucrose metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in plant-type cell wall IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
sucrose synthase 6
NP_001185390.1
  • sucrose synthase 6 (SUS6); CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 5 (TAIR:AT5G37180.1).
NP_001319374.1
  • sucrose synthase 6 (SUS6); CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 5 (TAIR:AT5G37180.1); Has 8933 Blast hits to 8929 proteins in 1765 species: Archae - 393; Bacteria - 5318; Metazoa - 100; Fungi - 128; Plants - 854; Viruses - 0; Other Eukaryotes - 2140 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    27584364..27588978 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001334591.1 → NP_001319374.1  sucrose synthase 6 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FX32
    UniProtKB/TrEMBL
    A0A178W7L7, W8Q3K7
    Conserved Domains (1) summary
    PLN00142
    Location:3 → 818
    PLN00142; sucrose synthase

  2. NM_105997.2 → NP_177480.1  sucrose synthase 6 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_177480.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FX32
    UniProtKB/TrEMBL
    A0A178W7L7, W8Q3K7
    Conserved Domains (1) summary
    PLN00142
    Location:3 → 818
    PLN00142; sucrose synthase

  3. NM_001198461.1 → NP_001185390.1  sucrose synthase 6 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001185390.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W7L7, F4HQ76
    Conserved Domains (3) summary
    PLN00142
    Location:1 → 774
    PLN00142; sucrose synthase
    pfam00534
    Location:531 → 709
    Glycos_transf_1; Glycosyl transferases group 1
    pfam00862
    Location:1 → 515
    Sucrose_synth; Sucrose synthase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FX32.1

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