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EMB3003 2-oxoacid dehydrogenases acyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 840346, updated on 15-Oct-2023

Summary

Gene symbol
EMB3003
Gene description
2-oxoacid dehydrogenases acyltransferase family protein
Primary source
Araport:AT1G34430
Locus tag
AT1G34430
See related
TAIR:AT1G34430
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
embryo defective 3003; F12K21.24; F12K21_24
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Genomic context

See EMB3003 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Sequence:
Chromosome: 1; NC_003070.9 (12587726..12590223, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene auxin response factor 21 Neighboring gene ncRNA Neighboring gene leucine-rich repeat transmembrane protein kinase family protein Neighboring gene uncharacterized protein Neighboring gene CYCLIN B1;5 Neighboring gene ncRNA

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
2-oxoacid dehydrogenases acyltransferase family protein
NP_174703.1
  • embryo defective 3003 (EMB3003); FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, acyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cytosolic ribosome, plasma membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: 2-oxoacid dehydrogenases acyltransferase family protein (TAIR:AT3G25860.1); Has 22237 Blast hits to 19790 proteins in 2346 species: Archae - 125; Bacteria - 13063; Metazoa - 719; Fungi - 466; Plants - 373; Viruses - 0; Other Eukaryotes - 7491 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    12587726..12590223 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103166.4NP_174703.1  2-oxoacid dehydrogenases acyltransferase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_174703.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LGH6, Q9C8P0, Q9LNK4
    UniProtKB/TrEMBL
    A0A178W4F9, A0A5S9WJ91, A0A654EGW1
    Conserved Domains (1) summary
    PRK11856
    Location:39463
    PRK11856; branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed