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AT1G03940 HXXXD-type acyl-transferase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839366, updated on 15-Feb-2024

Summary

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Gene symbol
AT1G03940
Gene description
HXXXD-type acyl-transferase family protein
Primary source
Araport:AT1G03940
Locus tag
AT1G03940
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F21M11.13; F21M11_13
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Genomic context

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See AT1G03940 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (1009228..1011145, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene vacuolar protein sorting-associated protein 2.3 Neighboring gene Calcium-binding EF hand family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

NM_100275.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
HXXXD-type acyl-transferase family protein
NP_171890.1
  • HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G03495.1); Has 1873 Blast hits to 1858 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 18; Plants - 1853; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    1009228..1011145 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100275.3 → NP_171890.1  HXXXD-type acyl-transferase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_171890.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9ZWB4
    UniProtKB/TrEMBL
    A0A5S9SHR8, A0A654E6W4
    Conserved Domains (1) summary
    pfam02458
    Location:10 → 458
    Transferase; Transferase family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9ZWB4.1

Gene LinkOut

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